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Adult time-series reference cohorts
Study design · collection id adult-time-series-cohorts
Healthy-adult cohorts sampled repeatedly over months to years: the Broad/OpenBiome BIO-ML donors, dense FMT-donor series, the Gothenburg longitudinal non-disease cohort, HPFS men sampled twice six months apart and the ciprofloxacin time-series volunteers.
Open in the sample explorer (3,763 samples)
5
studies with member samples
3,763
member samples in this release
Membership rule
| Studies | PRJNA544527, PRJNA448876, PRJEB38984, PRJNA354235, PRJNA974858 |
Composition
Age category
| adult | 3,379 |
| unknown | 384 |
Country
| US | 3,379 |
| SE | 384 |
Health condition
| healthy_control Healthy / control | 3,763 |
Member studies (5)
| Study | Title | Member samples | First public |
|---|---|---|---|
| PRJNA354235 | Human gut metagenome and metatranscriptome raw sequence reads. | 1,307 | 2017 |
| PRJNA974858 | Temporal shotgun sequencing of the gut microbiota of healthy adults taking ciprofloxacin | 1,040 | 2024 |
| PRJNA544527 | BIO-ML: The Broad Institute-OpenBiome Microbiome Library enables mechanistic studies with isolates, genomes, and longitudinal metagenomics and metabolomic data | 563 | 2019 |
| PRJNA448876 | Dense longitudinal metagenomic analysis of the gut microbiome of FMT donors | 469 | 2020 |
| PRJEB38984 | Longitudinal profiling of non-disease individuals. Microbiota data. | 384 | 2022 |