Gut microbiota in cardiac surgery-associated acute kidney injury
53 gut microbiome samples from patients with cardiac surgery-associated acute kidney injury (CSA_AKI), studied to investigate links between CSA_AKI and gut microbiota dysbiosis; location and design not specified. machine-written summary
53 samples · 53 runs · Age unknown · 2026 · 15.62 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 53 sample values (subject id) |
| ✓ Abstract / description | 106 sample values (health condition, health condition detail) |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
longitudinal — not resolved
10 of 34 people sampled more than once (29 samples; median 2, up to 6 per person).
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 0 | 0% | ||||
| country | 0 | 0% | ||||
| health_condition | 53 | 100% | 53 | |||
| subject_id | 53 | 100% | 53 | |||
| health_condition_detail | 53 | 100% | 53 |
Archive description
Cardiac surgery-associated acute kidney injury (CSA_AKI) may be related to the increased morbility and mortality in intensive care unit (ICU) patients. The bidirectional crosstalks suggest the important links between CSA_ AKI and dysbiosis of gut microbiota, so the aim of this study was to further investigate the possible connections during the process of CSA_AKI.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.72. Assay shotgun_dna.
- host run.host_tax_id · “9606”
- body site run.scientific_name · “human gut metagenome”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMD01843274 | health_condition | kidney_disease | R4 | 0.50 | study.description | Cardiac surgery-associated acute kidney injury |
| SAMD01843274 | health_condition_detail | Acute kidney injury (AKI) in ICU patients post-cardiac surgery. | R4 | 0.50 | study.description | Cardiac surgery-associated acute kidney injury |
| SAMD01843274 | subject_id | 201300442 | R1 | 0.70 | sample.name_rule:sample_title | 201300442G21 (SAMC5779941) |
Sequencing
53 runs over 53 samples · mean 15.66 Gbp per run (median 15.62 Gbp, total 829.96 Gbp; 53 runs with a base count) · layout PAIRED 53 · platform DNBSEQ 53 · models DNBSEQ-T7 (53) · 0% of runs with a Sandpiper profile · first public 2026-06-02
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: age_category, country. Share metadata
Downloads
PRJDB41236.csv.gz (2.3 KB) · parquet (70.9 KB) — all 53 samples, every field with route and confidence · PRJDB41236_determinations.csv.gz (1.7 KB) — 159 evidence rows