Gut microbiome and metabolic syndrome: cross-sectional study
Cross-sectional metagenomic analysis of 1342 gut microbiome samples examining associations between lifestyle-linked microbial metabolites, metabolic syndrome, and vascular health; location and participant details not reported. machine-written summary
1,342 samples · 1,342 runs · CN · Age unknown · 2026 · 4.29 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 1,342 sample values (collection date) |
| ○ Abstract / description | read; no usable statement |
| ✓ Full text | 4,026 sample values (antibiotic exposure, country, subject id) · PMC12911354 |
| ○ Supplementary tables | files read; no table could be matched to the samples |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 0 | 0% | ||||
| country | 1,342 | 100% | 1,342 | |||
| health_condition | 0 | 0% | ||||
| subject_id | 1,342 | 100% | 1,342 | |||
| antibiotic_exposure | 1,342 | 100% | 1,342 | |||
| collection_date | 1,342 | 100% | 1,342 |
- Microbial metabolites associated with healthy lifestyles in relation to metabolic syndrome and vascular health: a cross-sectional study. 2026 PMID 41432724 PMC12911354 own_data
Archive description
This project performed metagenomic sequencing of the gut microbiome in study participants.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.62. Assay shotgun_dna.
- host run.host_tax_id · “9606”
- body site study.description · “metagenomic sequencing of the gut microbiome”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMD01844722 | antibiotic_exposure | no | R3 | 0.70 | paper.body.methods_results | use of antibiotics within 3 months at sample collection |
| SAMD01844722 | collection_date | 2018-03-01 | R1 | 0.90 | biosample.attribute:collection_date | 2018-03-01 |
| SAMD01844722 | country | CN | R3 | 0.70 | paper.body.methods_results | Local residents, who have lived in Guangdong Province, China, for over 5 years |
| SAMD01844722 | subject_id | SAMD01844722 | R3 | 0.70 | design.one_sample_per_subject:fulltext | Finally, a total of 1,342 participants were included in this analysis |
Sequencing
1,342 runs over 1,342 samples · mean 4.33 Gbp per run (median 4.29 Gbp, total 5,815.49 Gbp; 1,342 runs with a base count) · layout PAIRED 1,342 · platform ILLUMINA 1,342 · models Illumina NovaSeq 6000 (1,342) · 0% of runs with a Sandpiper profile · first public 2026-06-02
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: age_category, health_condition. Share metadata
Downloads
PRJDB41738.csv.gz (29.0 KB) · parquet (125.2 KB) — all 1,342 samples, every field with route and confidence · PRJDB41738_determinations.csv.gz (28.6 KB) — 5,368 evidence rows