Gut microbiome of infants up to 12 months, Latvia
71 gut microbiome samples from Latvia, described as from toddlers up to 12 months of age; no health conditions, interventions, or study design specified in the available sources. machine-written summary
71 samples · 71 runs · LV · Infant / toddler · 2025 · 6.06 Gbp / sample
One study deposited as 2 BioProjects (178 catalog samples together): PRJEB101960 · PRJEB102170 · show together
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 213 sample values (collection date, country, sex) |
| ○ Abstract / description | read; no usable statement |
| ✓ Full text | 142 sample values (health condition, health condition detail) · PMC13591165 |
| ○ Supplementary tables | files read; no table could be matched to the samples |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 0 | 0% | ||||
| country | 71 | 100% | 71 | |||
| health_condition | 71 | 100% | 71 | |||
| subject_id | 0 | 0% | ||||
| collection_date | 71 | 100% | 71 | |||
| health_condition_detail | 71 | 100% | 71 | |||
| sex | 71 | 100% | 71 |
- New Insights into the Composition of the Early-Life Gut Microbiome: A Metagenomic Analysis of Fecal Samples in Children Up to 18 Months of Age. 2026 PMID 42769680 PMC13591165 own_data
Archive description
will be added as soon as the first draft of manuscript will be finalized
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of infant / toddler by deterministic_prior with confidence 0.90. Assay shotgun_dna.
- host external_curation.infant_catalog · “infant triage verdict include”
- body site study.title · “Gut microbiome of toddlers”
- body site external_curation.infant_catalog · “infant triage verdict include (gut/stool scope)”
- life stage external_curation.infant_catalog · “infant triage verdict include (0-3 y scope)”
- life stage study.title · “Gut microbiome of toddlers up to 12”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMEA120477162 | collection_date | 2023-01 | R1 | 0.85 | biosample.attribute:collection_date | 2023-01 |
| SAMEA120477162 | country | LV | R1 | 0.90 | biosample_attr | Latvia |
| SAMEA120477162 | health_condition | healthy_control | R3 | 0.70 | paper.body.methods_results | 91 healthy children (34 females and 57 males) aged 1–18 months |
| SAMEA120477162 | health_condition_detail | healthy children | R3 | 0.70 | paper.body.methods_results | 91 healthy children (34 females and 57 males) aged 1–18 months |
| SAMEA120477162 | sex | male | R1 | 0.90 | biosample_attr | Male |
Sequencing
71 runs over 71 samples · mean 6.25 Gbp per run (median 6.06 Gbp, total 443.92 Gbp; 71 runs with a base count) · layout PAIRED 71 · platform DNBSEQ 71 · models DNBSEQ-G400 (71) · 0% of runs with a Sandpiper profile · first public 2025-12-01
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: age_category, subject_id. Share metadata
Downloads
PRJEB102170.csv.gz (2.7 KB) · parquet (72.7 KB) — all 71 samples, every field with route and confidence · PRJEB102170_determinations.csv.gz (2.3 KB) — 355 evidence rows