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PRJEB73575 ERP158345

Pomegranate impact on gut microbiota in the UK

Impact of pomegranate on gut microbiota

10 gut metagenome samples from the United Kingdom studying the impact of pomegranate on gut microbiota; no further details on health conditions, intervention specifics, or study design are given. machine-written summary

10 samples · 10 runs · GB · Age unknown · 2026 · 6.16 Gbp / sample

Sources
✓Sequence archive 50–Abstract / description–Full text–Supplementary tables–External resources–User contribution–Human verified

Checked this project's papers and archive records yourself? Mark it human-verified.

what each source gave
✓ Sequence archive50 sample values (collection date, country, intervention, subject id, timepoint)
– Abstract / descriptionno abstract or project description
– Full textno open-access full text linked
– Supplementary tablesno supplementary tables available (or none open access)
– External resourcesnot covered by the external resources we ingest
– User contributionnothing uploaded yet
– Human verifiednot yet checked by a person · I checked this project — verify it
Interventions

intervention · arms resolved

supplementsupplement10 samples
single arm: samples on the intervention (no pre-intervention samples labelled)

design single_arm_before_after · Pomegranate supplementation

Samples at a glance
1 country
Age
unknown10
Country
GB10
Body site
primary10
Sequencing depth per sample · this project all projects
all projects, 0–0.03 Gbp: 25,080 samples (4 %)all projects, 0.03–0.1 Gbp: 17,066 samples (3 %)all projects, 0.1–0.3 Gbp: 29,179 samples (5 %)all projects, 0.3–1 Gbp: 47,044 samples (8 %)all projects, 1–3 Gbp: 124,983 samples (22 %)all projects, 3–10 Gbp: 253,728 samples (44 %)this project, 3–10 Gbp: 10 samplesall projects, 10–30 Gbp: 72,533 samples (13 %)all projects, 30–100 Gbp: 3,024 samples (1 %)all projects, 100–300 Gbp: 106 samples (0 %)all projects, ≥ 300 Gbp: 9 samples (0 %)project median 6.16 Gbp per sample0130Gbp
Sampling design and relatedness

longitudinal — not resolved

2 of 2 people sampled more than once (10 samples; median 5, up to 5 per person). Schedule stated by the source: “T0, T4, T6, T8, T12”.

How longitudinal and relatedness information is derived

Community composition

No Sandpiper profile for this project's samples yet.

Field coverage
fieldsamplescoverageR1R2R3R4
age_category0 0%
country10 100%10
health_condition0 0%
subject_id10 100%10
collection_date10 100%10
intervention10 100%10
timepoint_label10 100%10
Details
Archive description

Pls expalnd

How this project entered the registry

Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.55. Assay shotgun_dna.

  • host study.title · “Impact of pomegranate on gut microbiota”
  • body site study.title · “gut microbiota”
Evidence examples (one per field × route)
samplefieldvaluerouteconf.sourcequote
SAMEA115375842collection_date2023R10.90biosample.attribute:collection_date2023
SAMEA115375842countryGBR10.90sample.attr.geographic_location_country_and_or_seaUnited Kingdom
SAMEA115375842interventiondietary_supplementR10.85biosample.attribute:descriptionpomegranate_XP
SAMEA115375842subject_id6R10.70sample.name_rule:sample_aliasV6T0
SAMEA115375842timepoint_labelT0R10.70sample.name_rule:sample_aliasV6T0
Sequencing

10 runs over 10 samples · mean 6.06 Gbp per run (median 6.16 Gbp, total 60.60 Gbp; 10 runs with a base count) · layout PAIRED 10 · platform ILLUMINA 10 · models Illumina NovaSeq 6000 (10) · 0% of runs with a Sandpiper profile · first public 2026-03-04

Authors (0)

No author record.

Downloads

PRJEB73575.csv.gz (1.1 KB) · parquet (69.2 KB) — all 10 samples, every field with route and confidence · PRJEB73575_determinations.csv.gz (945 B) — 50 evidence rows

Samples (10 · every field this project has values for · hover a cell for its source)
Loading the sample table…