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PRJNA1086381 SRP501680

Human gut metagenome sample from Beijing, China

Homo sapiens Raw sequence reads

This project includes 1 human gut metagenome sample from an adult in Beijing, China. No health condition, intervention, or study design is specified in the available records. machine-written summary

87 samples · 87 runs · Age unknown · 2026 · 8.84 Gbp / sample

Sources
○Sequence archive–Abstract / description–Full text–Supplementary tables–External resources–User contribution–Human verified

Checked this project's papers and archive records yourself? Mark it human-verified.

what each source gave
○ Sequence archiverecords read; no usable sample values
– Abstract / descriptionno abstract or project description
– Full textno open-access full text linked
– Supplementary tablesno supplementary tables available (or none open access)
– External resourcesnot covered by the external resources we ingest
– User contributionnothing uploaded yet · share metadata
– Human verifiednot yet checked by a person · I checked this project — verify it
Samples at a glance
Age
adult87
Body site
excluded87
Sequencing depth per sample · this project all projects
all projects, 0–0.03 Gbp: 25,080 samples (4 %)all projects, 0.03–0.1 Gbp: 17,066 samples (3 %)all projects, 0.1–0.3 Gbp: 29,179 samples (5 %)all projects, 0.3–1 Gbp: 47,044 samples (8 %)all projects, 1–3 Gbp: 124,983 samples (22 %)all projects, 3–10 Gbp: 253,728 samples (44 %)this project, 3–10 Gbp: 75 samplesall projects, 10–30 Gbp: 72,533 samples (13 %)this project, 10–30 Gbp: 12 samplesall projects, 30–100 Gbp: 3,024 samples (1 %)all projects, 100–300 Gbp: 106 samples (0 %)all projects, ≥ 300 Gbp: 9 samples (0 %)project median 8.84 Gbp per sample0130Gbp
Community composition

No Sandpiper profile for this project's samples yet.

Field coverage
fieldsamplescoverageR1R2R3R4
age_category87 100%
country0 0%
health_condition0 0%
subject_id0 0%
Details
Archive description

Human RNA-seq reads Human gut metagenome

How this project entered the registry

Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.40. Assay shotgun_dna.

  • host study.title · “Homo sapiens Raw sequence reads”
  • body site study.description · “Human gut metagenome”
Sequencing

87 runs over 87 samples · mean 9.02 Gbp per run (median 8.84 Gbp, total 784.86 Gbp; 87 runs with a base count) · layout PAIRED 87 · platform ILLUMINA 87 · models Illumina NovaSeq 6000 (87) · 0% of runs with a Sandpiper profile · first public 2026-07-02

Authors (0)

No author record.

Help complete this project

3 of the 4 core fields are below 50% coverage: country, health_condition, subject_id. Share metadata

Downloads

PRJNA1086381.csv.gz (2.5 KB) · parquet (71.2 KB) — all 87 samples, every field with route and confidence · PRJNA1086381_determinations.csv.gz (168 B) — 0 evidence rows

Samples (87 · every field this project has values for · hover a cell for its source)
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