Human gut metagenome in adults and elderly
Shotgun metagenomics of 10 human gut samples from adult (7) and elderly (3) individuals. No country, health condition, or intervention information is provided. machine-written summary
10 samples · 10 runs · Adult · 2025 · 6.57 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 10 sample values (collection date) |
| – Abstract / description | no abstract or project description |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 10 | 100% | ||||
| country | 0 | 0% | ||||
| health_condition | 0 | 0% | ||||
| subject_id | 0 | 0% | ||||
| collection_date | 10 | 100% | 10 |
Archive description
Metagenomics of human
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of adult and elderly by opus_adjudicated with confidence 0.50. Assay shotgun_dna.
- host run.host_tax_id · “9606”
- host study.description · “Metagenomics of human”
- body site sample.attr.isolation_source · “Human feces (n=10/10)”
- life stage sample.attr.age · “40-59 (n=7/10)”
- life stage sample.attr.age · “60-79 (n=3/10)”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN48373675 | collection_date | 2024-11-30 | R1 | 0.90 | biosample.attribute:collection_date | 2024-11-30 |
Sequencing
10 runs over 10 samples · mean 6.59 Gbp per run (median 6.57 Gbp, total 65.95 Gbp; 10 runs with a base count) · layout SINGLE 10 · platform ILLUMINA 10 · models Illumina NovaSeq 6000 (10) · 100% of runs with a Sandpiper profile · first public 2025-06-09
Authors (0)
No author record.
Downloads
PRJNA1260161.csv.gz (1.1 KB) · parquet (68.7 KB) — all 10 samples, every field with route and confidence · PRJNA1260161_determinations.csv.gz (344 B) — 10 evidence rows