Human gut metagenome, healthy adults and elderly, cross-sectional
10 fecal metagenome samples from healthy control individuals (8 adults, 2 elderly), studied using a cross-sectional design. No country or intervention information was provided. machine-written summary
10 samples · 10 runs · Adult · 2025 · 6.40 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 20 sample values (age, collection date) |
| ✓ Abstract / description | 20 sample values (health condition, health condition detail) |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 10 | 100% | ||||
| country | 0 | 0% | ||||
| health_condition | 10 | 100% | 10 | |||
| subject_id | 0 | 0% | ||||
| age_at_collection_days | 10 | 100% | 10 | |||
| collection_date | 10 | 100% | 10 | |||
| health_condition_detail | 10 | 100% | 10 |
Archive description
normal Metagenomics of human feces
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of adult and elderly by sonnet_x2 with confidence 0.60. Assay shotgun_dna.
- host study.title · “Homo sapiens1 Raw sequence reads”
- host run.host_tax_id · “9606”
- body site study.description · “Metagenomics of human feces”
- life stage sample.attr.age · “33 (n=7/10)”
- life stage sample.attr.age · “64 (n=3/10)”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN49746844 | age_at_collection_days | 26298.0 | R1 | 0.70 | sample.attr.age | 72 |
| SAMN49746844 | collection_date | 2024-11-30 | R1 | 0.90 | biosample.attribute:collection_date | 2024-11-30 |
| SAMN49746844 | health_condition | healthy_control | R4 | 0.40 | study.description | normal Metagenomics of human feces |
| SAMN49746844 | health_condition_detail | Described as 'normal' human feces | R4 | 0.40 | study.description | normal Metagenomics of human feces |
Sequencing
10 runs over 10 samples · mean 6.54 Gbp per run (median 6.40 Gbp, total 65.42 Gbp; 10 runs with a base count) · layout SINGLE 10 · platform ILLUMINA 10 · models Illumina NovaSeq 6000 (10) · 100% of runs with a Sandpiper profile · first public 2025-08-10
Authors (0)
No author record.
Downloads
PRJNA1285573.csv.gz (1.2 KB) · parquet (69.6 KB) — all 10 samples, every field with route and confidence · PRJNA1285573_determinations.csv.gz (936 B) — 40 evidence rows