Human gut metagenome project
A collection of 61 human gut metagenome samples. No further details on population, location, health conditions, or study design are provided in the available sources. machine-written summary
61 samples · 61 runs · CN · Age unknown · 2026 · 7.01 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 61 sample values (country) |
| – Abstract / description | no abstract or project description |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 0 | 0% | ||||
| country | 61 | 100% | 61 | |||
| health_condition | 0 | 0% | ||||
| subject_id | 0 | 0% |
Archive description
Shotgun metagenomic sequencing of human fecal samples from a defined cohort to characterize gut microbial composition and metabolic functions. Differential metabolites and enriched metabolic pathways were identified via computational analysis, with KEGG pathway mapping revealing microbial metabolic shifts relevant to host physiology.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.75. Assay shotgun_dna.
- host study.title · “human gut Metagenome”
- body site study.description · “human fecal samples from a defined cohort”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN53097680 | country | CN | R1 | 0.85 | biosample.attribute:geo_loc_name | geo_loc_name: China:Shanghai |
Sequencing
61 runs over 61 samples · mean 7.20 Gbp per run (median 7.01 Gbp, total 439.42 Gbp; 61 runs with a base count) · layout PAIRED 61 · platform ILLUMINA 61 · models Illumina NovaSeq 6000 (61) · 0% of runs with a Sandpiper profile · first public 2026-04-19
Authors (0)
No author record.
Help complete this project
3 of the 4 core fields are below 50% coverage: age_category, health_condition, subject_id. Share metadata
Downloads
PRJNA1358001.csv.gz (2.2 KB) · parquet (70.1 KB) — all 61 samples, every field with route and confidence · PRJNA1358001_determinations.csv.gz (676 B) — 61 evidence rows