Human fecal metagenome project
142 fecal metagenome samples; no information given on population, location, health conditions, intervention, or study design. machine-written summary
142 samples · 142 runs · HK · Age unknown · 2026 · 12.08 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 284 sample values (collection date, country) |
| – Abstract / description | no abstract or project description |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 0 | 0% | ||||
| country | 142 | 100% | 142 | |||
| health_condition | 0 | 0% | ||||
| subject_id | 0 | 0% | ||||
| collection_date | 142 | 100% | 142 |
Archive description
We performed a metagenome-wide study on fecal samples from patients with colorectal adenoma from China.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of age unknown by sonnet_x2 with confidence 0.85. Assay shotgun_dna.
- host study.title · “human fecal metagenome”
- body site study.title · “human fecal metagenome”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN57317314 | collection_date | 2015-10-01 | R1 | 0.85 | biosample.attribute:collection_date | collection_date: 2015-10-01 |
| SAMN57317314 | country | HK | R1 | 0.85 | biosample.attribute:geo_loc_name | geo_loc_name: China: Hong Kong |
Sequencing
142 runs over 142 samples · mean 12.59 Gbp per run (median 12.08 Gbp, total 1,787.74 Gbp; 142 runs with a base count) · layout PAIRED 142 · platform ILLUMINA 142 · models Illumina HiSeq 2000 (142) · 0% of runs with a Sandpiper profile · first public 2026-04-24
Authors (0)
No author record.
Help complete this project
3 of the 4 core fields are below 50% coverage: age_category, health_condition, subject_id. Share metadata
Downloads
PRJNA1454700.csv.gz (4.1 KB) · parquet (73.9 KB) — all 142 samples, every field with route and confidence · PRJNA1454700_determinations.csv.gz (2.1 KB) — 284 evidence rows