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PRJNA1457283 SRP698198

Human genome sequencing, 51 adult samples

Homo sapiens Genome sequencing and assembly

Archive record for "Homo sapiens Genome sequencing and assembly" comprising 51 samples from adults; no country, health condition, intervention, or design information was provided in the available sources. machine-written summary

51 samples · 51 runs · Age unknown · 2026 · 5.78 Gbp / sample

Sources
✓Sequence archive 42✓Abstract / description 102–Full text–Supplementary tables–External resources–User contribution–Human verified

Checked this project's papers and archive records yourself? Mark it human-verified.

what each source gave
✓ Sequence archive42 sample values (collection date)
✓ Abstract / description102 sample values (lifestyle, lifestyle detail)
– Full textno open-access full text linked
– Supplementary tablesno supplementary tables available (or none open access)
– External resourcesnot covered by the external resources we ingest
– User contributionnothing uploaded yet · share metadata
– Human verifiednot yet checked by a person · I checked this project — verify it
Samples at a glance
Age
adult51
Body site
primary51
Collected 2022–2023
2022: 33 samples2023: 9 samples20222023
Sequencing depth per sample · this project all projects
all projects, 0–0.03 Gbp: 25,080 samples (4 %)all projects, 0.03–0.1 Gbp: 17,066 samples (3 %)all projects, 0.1–0.3 Gbp: 29,179 samples (5 %)all projects, 0.3–1 Gbp: 47,044 samples (8 %)all projects, 1–3 Gbp: 124,983 samples (22 %)all projects, 3–10 Gbp: 253,728 samples (44 %)this project, 3–10 Gbp: 51 samplesall projects, 10–30 Gbp: 72,533 samples (13 %)all projects, 30–100 Gbp: 3,024 samples (1 %)all projects, 100–300 Gbp: 106 samples (0 %)all projects, ≥ 300 Gbp: 9 samples (0 %)project median 5.78 Gbp per sample0130Gbp
Community composition

No Sandpiper profile for this project's samples yet.

Field coverage
fieldsamplescoverageR1R2R3R4
age_category51 100%
country0 0%
health_condition0 0%
subject_id0 0%
lifestyle51 100%51
lifestyle_detail51 100%51
collection_date42 82%42
Details
Archive description

this study longitudinally profiled the gut microbial characteristics of elite athletes before and after high-level national com[petitions through shotgun metagenomics.

How this project entered the registry

Classified as human gut / stool shotgun DNA metagenome of adult by sonnet_x2 with confidence 0.60. Assay shotgun_dna.

  • host study.title · “Homo sapiens Genome sequencing and assembly”
  • body site study.description · “gut microbial characteristics of elite athletes”
  • life stage study.description · “elite athletes before and after”
Evidence examples (one per field × route)
samplefieldvaluerouteconf.sourcequote
SAMN57453404collection_date2022-10-29R10.85biosample.attribute:collection_date2022-10-29
SAMN57453404lifestyleathleteR40.45ena.study_descriptionlongitudinally profiled the gut microbial characteristics of elite athletes
SAMN57453404lifestyle_detailelite athletes before and after high-level national competitionsR40.45ena.study_descriptionelite athletes before and after high-level national com[petitions
Sequencing

51 runs over 51 samples · mean 5.91 Gbp per run (median 5.78 Gbp, total 301.58 Gbp; 51 runs with a base count) · layout PAIRED 51 · platform ILLUMINA 51 · models Illumina Genome Analyzer (51) · 0% of runs with a Sandpiper profile · first public 2026-05-13

Authors (0)

No author record.

Help complete this project

3 of the 4 core fields are below 50% coverage: country, health_condition, subject_id. Share metadata

Downloads

PRJNA1457283.csv.gz (2.2 KB) · parquet (70.8 KB) — all 51 samples, every field with route and confidence · PRJNA1457283_determinations.csv.gz (1.4 KB) — 144 evidence rows

Samples (51 · every field this project has values for · hover a cell for its source)
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