Gut microbiota in adenomyosis, case-control study

Gut Microbiota in Adenomyosis patients

45 gut metagenome samples from adults in a case-control study comparing patients with adenomyosis to age-matched healthy controls. machine-written summary

45 samples · 45 runs · CN · Adult · 2026 · 10.03 Gbp / sample

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Sources

✓Sequence archive 360○Abstract / description✓Full text 180○Supplementary tables–External resources–User contribution–Human verified

Checked this project's papers and archive records yourself? Mark it human-verified.

what each source gave

✓ Sequence archive	360 sample values (collection date, country, health condition, health condition detail, latitude, location locality, location region, longitude)
○ Abstract / description	read; no usable statement
✓ Full text	180 sample values (antibiotic exposure, location site, sex, subject id) · PMC13284149
○ Supplementary tables	files read; no table could be matched to the samples
– External resources	not covered by the external resources we ingest
– User contribution	nothing uploaded yet
– Human verified	not yet checked by a person · I checked this project — verify it

Samples at a glance

2 sampling locations · 1 country

Age

adult45

Condition

healthy_control23

other_disease22

Sex

female45

Country

CN45

Body site

primary45

Sequencing depth per sample · this project all projects

Community composition

No Sandpiper profile for this project's samples yet.

Field coverage

field	samples	coverage	R1	R3
age_category	45	100%
country	45	100%	45
health_condition	45	100%	45
subject_id	45	100%		45
antibiotic_exposure	45	100%		45
collection_date	45	100%	45
detailed_location	45	100%
health_condition_detail	45	100%	45
latitude	45	100%	45
location_locality	45	100%	45
location_region	45	100%	45
location_site	45	100%		45
longitude	45	100%	45
sex	45	100%		45

Papers (1)

Causal relationship between gut microbiota and adenomyosis: metagenomics sequencing and Mendelian randomization. 2026 PMID 42338489 PMC13284149 own_data

Details

Archive description

We used metagenomic technology, divided the participants into patient and control groups, and tested the gut microbiota of patients with adenomyosis.

How this project entered the registry

Classified as human gut / stool shotgun DNA metagenome of adult by deterministic_prior with confidence 0.90. Assay shotgun_dna.

host external_curation.infant_catalog · “infant triage reason_code age_adult_only”
body site study.title · “Gut Microbiota in Adenomyosis”
body site study.description · “and tested the gut microbiota of patients”
life stage external_curation.infant_catalog · “infant triage reason_code age_adult_only”

Evidence examples (one per field × route)

sample	field	value	route	conf.	source	quote
SAMN60554004	antibiotic_exposure	no	R3	0.70	paper.fulltext.methods	Use of antibiotics, probiotics, or related agents within four weeks before enrollment
SAMN60554004	collection_date	2024-06-22	R1	0.90	biosample.attribute:collection_date	2024-06-22
SAMN60554004	country	CN	R1	0.90	sample.attr.geo_loc_name	China: Guizhou, Zunyi
SAMN60554004	health_condition	other_disease	R1	0.70	sample.name_rule:title	AM1
SAMN60554004	health_condition_detail	AM	R1	0.70	sample.name_rule:title	AM1
SAMN60554004	latitude	27.7200	R1	0.90	biosample.attribute:lat_lon	27.72 N 106.93 E
SAMN60554004	location_locality	Zunyi	R1	0.85	biosample.attribute:geo_loc_name	China: Guizhou, Zunyi
SAMN60554004	location_region	Guizhou	R1	0.85	biosample.attribute:geo_loc_name	China: Guizhou, Zunyi
SAMN60554004	location_site	Third Affiliated Hospital of Zunyi Medical University	R3	0.70	paper.fulltext.methods	Third Affiliated Hospital of Zunyi Medical University
SAMN60554004	longitude	106.9300	R1	0.90	biosample.attribute:lat_lon	27.72 N 106.93 E
SAMN60554004	sex	female	R3	0.60	paper.fulltext.results	study population of 45 women
SAMN60554004	subject_id	SAMN60554004	R3	0.70	design.one_sample_per_subject:fulltext	22 patients with AM and 23 age-matched healthy controls recruited from the health-screening center of our institution were enrolled

Sequencing

45 runs over 45 samples · mean 10.03 Gbp per run (median 10.03 Gbp, total 451.20 Gbp; 45 runs with a base count) · layout PAIRED 45 · platform DNBSEQ 45 · models DNBSEQ-G400 (45) · 0% of runs with a Sandpiper profile · first public 2026-06-02

Authors (5)

Tang C first · Li B · Chen J · Liu X · She C last

Downloads

PRJNA1473304.csv.gz (2.3 KB) · parquet (73.5 KB) — all 45 samples, every field with route and confidence · PRJNA1473304_determinations.csv.gz (5.2 KB) — 540 evidence rows

Samples (45 · every field this project has values for · hover a cell for its source)

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