Fecal metagenomics in children and adolescents
60 fecal metagenome samples from human subjects, predominantly children, with smaller numbers of adolescent and infant samples. No country, health condition, or intervention information is provided. machine-written summary
60 samples · 60 runs · CN · Child · 2026 · 11.97 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 298 sample values (age, collection date, country, location region, sex) |
| ○ Abstract / description | read; no usable statement |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 60 | 100% | ||||
| country | 60 | 100% | 60 | |||
| health_condition | 0 | 0% | ||||
| subject_id | 0 | 0% | ||||
| age_at_collection_days | 60 | 100% | 60 | |||
| detailed_location | 60 | 100% | ||||
| location_region | 60 | 100% | 60 | |||
| sex | 60 | 100% | 60 | |||
| collection_date | 58 | 97% | 58 |
Archive description
Metagenomic sequencing was performed on human fecal specimens. This dataset contains raw sequencing reads generated for gut microbiome profiling.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of child by deterministic_prior with confidence 0.90. Assay shotgun_dna.
- host external_curation.infant_catalog · “infant triage reason_code age_child_over_36m”
- body site study.title · “Fecal metagenomic sequencing from”
- body site study.description · “performed on human fecal specimens. This dataset”
- life stage external_curation.infant_catalog · “infant triage reason_code age_child_over_36m”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN62599013 | age_at_collection_days | 4383.0 | R1 | 0.90 | sample.attr.age | 12 years |
| SAMN62599015 | collection_date | 2026-03-14 | R1 | 0.90 | biosample.attribute:collection_date | 2026-03-14 |
| SAMN62599013 | country | CN | R1 | 0.90 | sample.attr.geo_loc_name | China:Ningxia |
| SAMN62599013 | location_region | Ningxia | R1 | 0.85 | biosample.attribute:geo_loc_name | China:Ningxia |
| SAMN62599013 | sex | female | R1 | 0.90 | sample.attr.sex | female |
Sequencing
60 runs over 60 samples · mean 12.14 Gbp per run (median 11.97 Gbp, total 728.35 Gbp; 60 runs with a base count) · layout PAIRED 60 · platform ILLUMINA 60 · models Illumina NovaSeq X Plus (60) · 0% of runs with a Sandpiper profile · first public 2026-08-23
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: health_condition, subject_id. Share metadata
Downloads
PRJNA1516100.csv.gz (2.5 KB) · parquet (71.7 KB) — all 60 samples, every field with route and confidence · PRJNA1516100_determinations.csv.gz (2.4 KB) — 298 evidence rows