Gut microbiota of fathers of children with autism
110 adult human gut metagenome samples from fathers of children with autism; country and design details not specified. machine-written summary
110 samples · 110 runs · Adult · 2021 · 25.0 Mbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 220 sample values (sex, subject id) |
| – Abstract / description | no abstract or project description |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
longitudinal — not resolved
16 of 94 people sampled more than once (32 samples; median 2, up to 2 per person).
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 110 | 100% | ||||
| country | 0 | 0% | ||||
| health_condition | 0 | 0% | ||||
| subject_id | 110 | 100% | 110 | |||
| sex | 110 | 100% | 110 |
Archive description
Human gut microbiota of the fathers of autism children
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of adult by sonnet_x2 with confidence 0.57. Assay shotgun_dna.
- host run.scientific_name · “human gut metagenome”
- body site run.scientific_name · “human gut metagenome”
- life stage study.description · “gut microbiota of the fathers”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN18357767 | sex | male | R1 | 0.90 | sample.attr.sex | male |
| SAMN18357767 | subject_id | 001 | R1 | 0.70 | sample.name_rule:alias | JSH0F001FSO001 |
Sequencing
110 runs over 110 samples · mean 24.9 Mbp per run (median 25.0 Mbp, total 2.74 Gbp; 110 runs with a base count) · layout PAIRED 110 · platform ILLUMINA 110 · models Illumina MiSeq (110) · 0% of runs with a Sandpiper profile · first public 2021-03-29
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: country, health_condition. Share metadata
Downloads
PRJNA715668.csv.gz (3.2 KB) · parquet (72.9 KB) — all 110 samples, every field with route and confidence · PRJNA715668_determinations.csv.gz (2.5 KB) — 220 evidence rows