Gut microbiome of professional cyclists in Asturias, Spain
Cross-sectional study of 85 gut microbiome samples from adult professional competitive cyclists in Asturias, Spain. machine-written summary
85 samples · 85 runs · ES · Adult · 2023 · 3.32 Gbp / sample
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 595 sample values (collection date, country, latitude, location region, longitude, subject id, timepoint) |
| ✓ Abstract / description | 170 sample values (lifestyle, lifestyle detail) |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet |
| – Human verified | not yet checked by a person · I checked this project — verify it |
longitudinal — not resolved
21 of 23 people sampled more than once (83 samples; median 4, up to 8 per person).
Genera, mean relative abundance over 80 profiled gut samples of this project (Sandpiper SingleM profiles, GTDB R232; low-depth and non-metagenome profiles left out).
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 85 | 100% | ||||
| country | 85 | 100% | 85 | |||
| health_condition | 0 | 0% | ||||
| subject_id | 85 | 100% | 85 | |||
| collection_date | 85 | 100% | 85 | |||
| detailed_location | 85 | 100% | ||||
| latitude | 85 | 100% | 85 | |||
| lifestyle | 85 | 100% | 85 | |||
| lifestyle_detail | 85 | 100% | 85 | |||
| location_region | 85 | 100% | 85 | |||
| longitude | 85 | 100% | 85 | |||
| timepoint_label | 85 | 100% | 85 |
Archive description
Microbiota of professional competitive cyclists
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of adult by deterministic_prior with confidence 0.90. Assay shotgun_dna.
- host external_curation.infant_catalog · “infant triage reason_code age_adult_only”
- body site study.title · “Gut Instincts: professional cyclists”
- body site external_curation.infant_catalog · “body_site_call gut”
- life stage external_curation.infant_catalog · “infant triage reason_code age_adult_only”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN32108606 | collection_date | 2020 | R1 | 0.90 | biosample.attribute:collection_date | 2020 |
| SAMN32108606 | country | ES | R1 | 0.90 | sample.attr.geo_loc_name | Spain: Asturias |
| SAMN32108606 | latitude | 43.3546 | R1 | 0.90 | biosample.attribute:lat_lon | 43.35462849 N 5.87166109 W |
| SAMN32108606 | lifestyle | athlete | R4 | 0.40 | ena.study_title | professional cyclists have a gut microbiome |
| SAMN32108606 | lifestyle_detail | professional competitive cyclists | R4 | 0.40 | ena.study_title | professional cyclists have a gut microbiome |
| SAMN32108606 | location_region | Asturias | R1 | 0.85 | biosample.attribute:geo_loc_name | Spain: Asturias |
| SAMN32108606 | longitude | -5.8717 | R1 | 0.90 | biosample.attribute:lat_lon | 43.35462849 N 5.87166109 W |
| SAMN32108606 | subject_id | 001 | R1 | 0.50 | sample.attr.donor | 001 |
| SAMN32108606 | timepoint_label | Beginning | R1 | 0.85 | sample.attr.time | Beginning |
Sequencing
85 runs over 85 samples · mean 3.89 Gbp per run (median 3.32 Gbp, total 330.71 Gbp; 85 runs with a base count) · layout PAIRED 85 · platform ILLUMINA 85 · models Illumina HiSeq 2500 (85) · 94% of runs with a Sandpiper profile · first public 2023-11-29
Authors (0)
No author record.
Downloads
PRJNA909977.csv.gz (3.1 KB) · parquet (73.4 KB) — all 85 samples, every field with route and confidence · PRJNA909977_determinations.csv.gz (4.5 KB) — 765 evidence rows