Pediatric nephrotic syndrome gut microbiome and virome
122 samples from children, examining gut microbiome and virome dysbiosis in idiopathic nephrotic syndrome. No further details on location, design, or health conditions are given. machine-written summary
122 samples · 122 runs · Child · 2026 · 0.76 Gbp / sample
One study deposited as 2 BioProjects (245 catalog samples together): PRJNA1295133 · PRJNA1295840 · show together
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 405 sample values (health condition, health condition detail, subject id, timepoint) |
| – Abstract / description | no abstract or project description |
| – Full text | no open-access full text linked |
| – Supplementary tables | no supplementary tables available (or none open access) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet · share metadata |
| – Human verified | not yet checked by a person · I checked this project — verify it |
longitudinal — not resolved
Schedule stated by the source: “Patient samples coded with timepoint suffixes T0/T1/T2 per subject (e.g., V.NS.043.T0, V.NS.043.T2); controls have single samples.”.
No Sandpiper profile for this project's samples yet.
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 122 | 100% | ||||
| country | 0 | 0% | ||||
| health_condition | 122 | 100% | 122 | |||
| subject_id | 39 | 32% | 39 | |||
| health_condition_detail | 122 | 100% | 122 | |||
| timepoint_label | 122 | 100% | 122 |
Archive description
Idiopathic nephrotic syndrome (INS) is the most frequent glomerular disorder in children, yet its etiology remains unclear. Growing evidence implicates gut microbiome dysbiosis and immune dysregulation in its pathogenesis, but comprehensive multi-kingdom microbiome studies are lacking.
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of child by sonnet_x2 with confidence 0.62. Assay shotgun_dna.
- host study.title · “Gut Microbiome and Virome Dysbiosis in Pediatric”
- body site study.title · “Gut Microbiome and Virome Dysbiosis”
- life stage study.title · “Pediatric Idiopathic Nephrotic Syndrome”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN50191465 | health_condition | healthy_control | R1 | 0.85 | biosample.attribute:description | description: CTR |
| SAMN50191465 | health_condition_detail | CTR | R1 | 0.85 | biosample.attribute:description | description: CTR |
| SAMN50191465 | subject_id | CTR.NS.001 | R1 | 0.70 | sample.name_rule:biosample.title | CTR.NS.01 / V.CTR.NS.001 |
| SAMN50191465 | timepoint_label | CTR | R1 | 0.85 | biosample.attribute:description | description: CTR |
Sequencing
122 runs over 122 samples · mean 0.90 Gbp per run (median 0.76 Gbp, total 110.33 Gbp; 122 runs with a base count) · layout PAIRED 122 · platform ILLUMINA 122 · models Illumina MiSeq (122) · 0% of runs with a Sandpiper profile · first public 2026-06-17
Authors (0)
No author record.
Help complete this project
2 of the 4 core fields are below 50% coverage: country, subject_id. Share metadata
Downloads
PRJNA1295840.csv.gz (3.7 KB) · parquet (73.8 KB) — all 122 samples, every field with route and confidence · PRJNA1295840_determinations.csv.gz (3.8 KB) — 405 evidence rows