Fecal viral metagenome in ASD vs healthy children, China
Case-control study of 22 fecal viral metagenome samples from children with autism spectrum disorder and healthy children in Zhenjiang, China. machine-written summary
22 samples · 22 runs · CN · Child · 2026 · 4.05 Gbp / sample · cohort Comparison of gut viral communities between autism
One study deposited as 2 BioProjects (44 catalog samples together): PRJDB38518 · PRJNA1322369 · show together
Checked this project's papers and archive records yourself? Mark it human-verified.
what each source gave
| ✓ Sequence archive | 132 sample values (collection date, country, latitude, location locality, location region, longitude) |
| ○ Abstract / description | read; no usable statement |
| ✓ Full text | 22 sample values (antibiotic exposure) · PMC12558881 |
| ✓ Supplementary tables | 44 sample values (health condition, health condition detail) |
| – External resources | not covered by the external resources we ingest |
| – User contribution | nothing uploaded yet |
| – Human verified | not yet checked by a person · I checked this project — verify it |
Genera, mean relative abundance over 21 profiled gut samples of this project (Sandpiper SingleM profiles, GTDB R232; low-depth and non-metagenome profiles left out).
| field | samples | coverage | R1 | R2 | R3 | R4 |
|---|---|---|---|---|---|---|
| age_category | 22 | 100% | ||||
| country | 22 | 100% | 22 | |||
| health_condition | 22 | 100% | 22 | |||
| subject_id | 0 | 0% | ||||
| antibiotic_exposure | 22 | 100% | 22 | |||
| collection_date | 22 | 100% | 22 | |||
| detailed_location | 22 | 100% | ||||
| health_condition_detail | 22 | 100% | 22 | |||
| latitude | 22 | 100% | 22 | |||
| location_locality | 22 | 100% | 22 | |||
| location_region | 22 | 100% | 22 | |||
| longitude | 22 | 100% | 22 |
- Comparison of gut viral communities between autism spectrum disorder and healthy children. 2025 PMID 41163852 PMC12558881 own_data
Archive description
Viral metagenome in feces from ASD and healthy children
How this project entered the registry
Classified as human gut / stool shotgun DNA metagenome of child by sonnet_x2 with confidence 0.55. Assay shotgun_dna.
- host run.host_tax_id · “9606”
- body site study.description · “Viral metagenome in feces”
- life stage study.description · “ASD and healthy children”
Evidence examples (one per field × route)
| sample | field | value | route | conf. | source | quote |
|---|---|---|---|---|---|---|
| SAMN51242949 | antibiotic_exposure | no | R3 | 0.70 | paper.body.methods | all participants were required to be no use of antibiotics or antiviral drugs within 3 weeks |
| SAMN51242949 | collection_date | 2023-12-01 | R1 | 0.90 | biosample.attribute:collection_date | 2023-12-01 |
| SAMN51242949 | country | CN | R1 | 0.90 | sample.attr.geo_loc_name | China: Zhenjiang |
| SAMN51242949 | health_condition | neurological_psychiatric | R2 | 0.80 | paper.supp.Table2.xlsx[Sheet1!Group] | Group=ASD |
| SAMN51242949 | health_condition_detail | ASD | R2 | 0.80 | paper.supp.Table2.xlsx[Sheet1!Group] | Group=ASD |
| SAMN51242949 | latitude | 32.1200 | R1 | 0.90 | biosample.attribute:lat_lon | 32.12 N 119.27 E |
| SAMN51242949 | location_locality | Zhenjiang | R1 | 0.85 | biosample.attribute:geo_loc_name | China: Zhenjiang |
| SAMN51242949 | location_region | Jiangsu Sheng | R1 | 0.60 | biosample.attribute:lat_lon | 32.12 N 119.27 E |
| SAMN51242949 | longitude | 119.2700 | R1 | 0.90 | biosample.attribute:lat_lon | 32.12 N 119.27 E |
Sequencing
22 runs over 22 samples · mean 3.13 Gbp per run (median 4.05 Gbp, total 68.90 Gbp; 22 runs with a base count) · layout PAIRED 22 · platform ILLUMINA 22 · models Illumina MiSeq (22) · 100% of runs with a Sandpiper profile · first public 2026-01-02 – 2026-01-20
Authors (0)
No author record.
Downloads
PRJNA1322369.csv.gz (1.5 KB) · parquet (70.9 KB) — all 22 samples, every field with route and confidence · PRJNA1322369_determinations.csv.gz (2.1 KB) — 198 evidence rows