What changed in R2026.11 (package 1.11.0, 2026-09-28)
129,863
sample × field values added (53,008 samples, 307 studies)
0
catalog studies added
0
registry studies added
Values added, by field
| field | values | samples | studies |
|---|---|---|---|
| health_condition | 36,098 | 36,098 | 239 |
| health_condition_detail | 28,277 | 28,277 | 144 |
| antibiotic_exposure | 22,908 | 22,908 | 99 |
| sex | 13,499 | 13,499 | 84 |
| age_at_collection_days | 13,372 | 13,372 | 87 |
| bmi | 9,991 | 9,991 | 62 |
| country | 5,718 | 5,718 | 27 |
By route: R2 112,398 · R1 17,465
Studies with the most added values
| study | title | values | samples touched | samples in study | fields | routes |
|---|---|---|---|---|---|---|
| PRJEB32762 | iMSMS Baranzini data | 7,908 | 3,190 | 3,765 | age_at_collection_days, antibiotic_exposure, bmi, country, health_condition, sex | R2 |
| PRJEB39223 | Microbiome connections with host metabolism and habitual diet from the PREDICT 1 metagenomic study | 6,587 | 1,098 | 1,098 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R2 |
| PRJNA398089 | Longitudinal Multi’omics of the Human Microbiome in Inflammatory Bowel Disease | 6,398 | 2,041 | 2,041 | age_at_collection_days, antibiotic_exposure, health_condition, health_condition_detail | R1, R2 |
| PRJNA510445 | The relationship of fecal microbiomes and nutritional status in cystic fibrosis | 6,146 | 1,279 | 1,279 | age_at_collection_days, antibiotic_exposure, health_condition, health_condition_detail, sex | R2 |
| PRJEB11532 | Towards personalized nutrition by prediction of glycemic responses | 5,370 | 900 | 969 | antibiotic_exposure, bmi, country, health_condition, health_condition_detail, sex | R2 |
| PRJNA48479 | Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome s | 4,188 | 2,096 | 2,096 | age_at_collection_days, bmi, country, health_condition, health_condition_detail | R2 |
| PRJEB32631 | Early_life_microbiota_colonisation | 3,394 | 1,644 | 2,387 | age_at_collection_days, antibiotic_exposure, health_condition, health_condition_detail | R2 |
| PRJEB37249 | Statin therapy is associated with lower prevalence of gut microbiota dysbiosis | 3,165 | 845 | 888 | antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R2 |
| PRJNA354235 | Human gut metagenome and metatranscriptome raw sequence reads. | 3,163 | 1,307 | 1,307 | antibiotic_exposure, health_condition_detail, sex | R2 |
| PRJEB24771 | Legumes and Growth Data | 2,784 | 1,392 | 1,392 | health_condition, health_condition_detail | R2 |
| PRJEB45799 | The person-to-person transmission landscape of the gut and oral microbiomes | 2,181 | 465 | 2,394 | age_at_collection_days, antibiotic_exposure, bmi, country, health_condition, health_condition_detail | R1, R2 |
| PRJNA797994 | Gut Microbiome of Helminth Infected Indigenous Malaysians Is Context Dependent | 2,070 | 650 | 650 | age_at_collection_days, antibiotic_exposure, health_condition, health_condition_detail | R1, R2 |
| PRJNA613947 | human gut metagenome Metagenome | 2,028 | 347 | 348 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R2 |
| PRJEB11419 | American Gut Project | 1,780 | 634 | 7,353 | age_at_collection_days, bmi, health_condition, health_condition_detail, sex | R1, R2 |
| PRJNA695570 | Human gut metagenomes of healthy mothers and their children | 1,767 | 1,767 | 1,767 | health_condition_detail | R2 |
| PRJDB4176 | metagenomic data from human fecal samples | 1,605 | 430 | 645 | age_at_collection_days, bmi, health_condition, sex | R2 |
| PRJNA290380 | A longitudinal analysis of the developing gut microbiome in infants from Finland, Estonia, and Russi | 1,577 | 780 | 785 | antibiotic_exposure, health_condition, health_condition_detail | R2 |
| PRJEB37731 | Effects of the menstrual cycle and hormonal contraceptives on the human microbiome | 1,560 | 1,560 | 2,825 | antibiotic_exposure | R2 |
| PRJEB9576 | Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut Microbi | 1,473 | 250 | 250 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R2 |
| PRJNA319574 | Gut microbial interactions with the inflammatory cytokine production capacity | 1,392 | 471 | 471 | antibiotic_exposure, bmi, sex | R2 |
| PRJEB6997 | Gut and Oral Microbiome Dysbiosis in Rheumatoid Arthritis | 1,381 | 232 | 530 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R2 |
| PRJEB1220 | A method for identifying metagenomic species and variable genetic elements by exhaustive co-abundanc | 1,244 | 395 | 396 | age_at_collection_days, antibiotic_exposure, bmi, sex | R2 |
| PRJEB6337 | Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. | 1,203 | 312 | 312 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R1, R2 |
| PRJNA492716 | human gut metagenome Raw sequence reads | 1,032 | 516 | 560 | health_condition, health_condition_detail | R2 |
| PRJNA356102 | human gut metagenome in RA | 976 | 168 | 168 | age_at_collection_days, antibiotic_exposure, bmi, health_condition, health_condition_detail, sex | R1, R2 |