What changed in R2026.17 (package 1.16.0, 2026-10-08)
130,386
sample × field values added (70,139 samples, 196 studies)
4
catalog studies added
0
registry studies added
Values added, by field
| field | values | samples | studies |
|---|---|---|---|
| collection_date | 24,992 | 24,992 | 61 |
| location_locality | 22,261 | 22,261 | 73 |
| location_site | 18,782 | 18,782 | 53 |
| location_region | 14,105 | 14,105 | 40 |
| health_condition_detail | 12,394 | 12,394 | 31 |
| health_condition | 10,249 | 10,249 | 48 |
| lifestyle | 7,826 | 7,826 | 13 |
| lifestyle_detail | 7,589 | 7,589 | 12 |
| bmi | 6,155 | 6,155 | 5 |
| age_at_collection_days | 2,297 | 2,297 | 3 |
| antibiotic_exposure | 1,771 | 1,771 | 2 |
| country | 1,697 | 1,697 | 8 |
| subject_id | 164 | 164 | 6 |
| sex | 62 | 62 | 4 |
| timepoint_label | 42 | 42 | 4 |
By route: R3 59,666 · R1 40,811 · R4 27,501 · R2 2,408
Studies with the most added values
| study | title | values | samples touched | samples in study | fields | routes |
|---|---|---|---|---|---|---|
| PRJEB11419 | American Gut Project | 15,563 | 6,622 | 7,353 | bmi, country, health_condition, health_condition_detail | R1 |
| PRJEB49383 | Preterm Neonatal Stool Metagenomes | 7,053 | 2,351 | 2,351 | collection_date, location_locality, location_site | R1, R3 |
| PRJEB28671 | A_novel_nano_iron_supplement__IHAT__to_safely_combact_iron_deficiency_and_anemia | 6,420 | 1,605 | 1,605 | lifestyle, lifestyle_detail, location_locality, location_region | R3 |
| PRJEB70237 | HELMi infant and parental stool WGS metagenomes | 5,328 | 2,664 | 2,664 | collection_date, location_region | R1, R3 |
| PRJNA695570 | Human gut metagenomes of healthy mothers and their children | 5,301 | 1,767 | 1,767 | antibiotic_exposure, location_locality, location_region | R2, R3 |
| PRJNA1468137 | Maternal influences on infant gut microbiome and health | 4,749 | 4,749 | 4,749 | location_site | R4 |
| PRJNA1081952 | BRISC microbiome sub study | 4,267 | 1,422 | 1,422 | collection_date, lifestyle, lifestyle_detail, timepoint_label | R1, R3 |
| PRJNA806984 | Microbiota and Health Study (Dhaka, Bangladesh) | 4,041 | 1,347 | 1,347 | collection_date, location_locality, location_site | R4 |
| PRJEB45799 | The person-to-person transmission landscape of the gut and oral microbiomes | 3,773 | 1,937 | 2,394 | age_at_collection_days, health_condition, health_condition_detail | R1 |
| PRJEB51728 | Infant stool metagenomic datasets | 3,500 | 875 | 875 | collection_date, lifestyle, lifestyle_detail, location_region | R3, R4 |
| PRJEB83236 | SEPSIS Human Microbiome Study | 3,080 | 770 | 1,609 | collection_date, lifestyle, lifestyle_detail, location_locality | R1, R3, R4 |
| PRJEB24771 | Legumes and Growth Data | 3,022 | 1,392 | 1,392 | bmi, lifestyle, lifestyle_detail | R1, R4 |
| PRJNA838575 | CHILD Infant Stool Raw sequence reads | 2,934 | 2,934 | 2,934 | collection_date | R1 |
| PRJNA1140720 | Modelling human microbiome transmission in a nursery setting | 2,326 | 1,163 | 1,163 | collection_date, location_locality | R3 |
| PRJNA916952 | Stanford's Outcomes Research in Kids (STORK) Virome | 2,288 | 1,144 | 1,144 | collection_date, location_region | R1, R3 |
| PRJEB111647 | Restoration of Microbiota in Newborns | 2,146 | 1,441 | 1,441 | health_condition, health_condition_detail | R1 |
| PRJNA903921 | Gut Mycobiome Maturation and Its Determinants during Infancy: A Comparison of Shotgun Metagenomic an | 2,066 | 1,033 | 1,033 | location_locality, location_site | R3 |
| PRJNA1045584 | Impact of SARS-CoV-2 in stool sample from women living with HIV and HIV-negative women and their inf | 1,965 | 655 | 655 | collection_date, location_locality, location_site | R1, R3 |
| PRJNA807448 | The Antibiotics and Immune Responses Study | 1,836 | 459 | 459 | collection_date, health_condition, location_locality, location_site | R1, R3, R4 |
| PRJEB83552 | SEPSIS Lactobacillus plantarum ATCC 202195 Microbiome Study | 1,674 | 1,674 | 1,674 | location_locality | R3 |
| PRJNA1113165 | Misame3 gut metagenomic | 1,472 | 736 | 736 | lifestyle, lifestyle_detail | R4 |
| PRJNA473126 | Infant Diet and Maternal Gestational Weight Gain Influence Functional Maturation of the Infant Gut M | 1,365 | 402 | 402 | health_condition, health_condition_detail, location_locality, location_region, location_site | R1, R3, R4 |
| PRJNA1106565 | Antibiotic exposure is associated with minimal gut microbiome perturbations in healthy term infants | 1,338 | 669 | 669 | health_condition, location_site | R3, R4 |
| PRJNA947616 | Gut microbiome and bloodstream infections among premature infants in Singapore | 1,212 | 606 | 606 | collection_date, location_site | R3 |
| PRJNA497734 | Longitudinal gut microbiome sequence data combined from several DIABIMMUNE microbiome studies | 1,154 | 1,154 | 1,154 | collection_date | R3 |
Catalog studies added
| study | title | samples |
|---|---|---|
| PRJNA1501268 | Gut microbiota changes following inulin and a placebo in older adults and healthy controls | 153 |
| PRJNA895415 | Association of gut microbial dysbiosis with disease severity, response to therapy and disease outcom | 84 |
| PRJNA1441102 | Effect of AG1 supplementation on nutritional adequacy and gut microbial composition in trained adult | 79 |
| PRJNA783956 | gut metagenome | 24 |