What changed in R2026.18 (package 1.17.0, 2026-10-09)
457,213
sample × field values added (252,443 samples, 1,494 studies)
0
catalog studies added
0
registry studies added
Values added, by field
| field | values | samples | studies |
|---|---|---|---|
| subject_id | 107,825 | 107,825 | 738 |
| timepoint_label | 92,634 | 92,634 | 570 |
| collection_date | 63,114 | 63,114 | 231 |
| health_condition | 47,732 | 47,732 | 431 |
| health_condition_detail | 42,031 | 42,031 | 299 |
| intervention | 26,821 | 26,821 | 248 |
| antibiotic_exposure | 12,518 | 12,518 | 99 |
| age_at_collection_days | 11,467 | 11,467 | 88 |
| sex | 9,385 | 9,385 | 111 |
| diet | 9,379 | 9,379 | 32 |
| smoking_status | 7,429 | 7,429 | 9 |
| location_site | 5,874 | 5,874 | 36 |
| medication | 5,643 | 5,643 | 36 |
| country | 5,167 | 5,167 | 43 |
| bmi | 3,013 | 3,013 | 33 |
| location_locality | 2,029 | 2,029 | 23 |
| lifestyle | 1,982 | 1,982 | 17 |
| location_region | 1,861 | 1,861 | 13 |
| medication_detail | 855 | 855 | 9 |
| lifestyle_detail | 283 | 283 | 5 |
| intervention_detail | 133 | 133 | 2 |
| diet_detail | 38 | 38 | 4 |
By route: R1 360,336 · R2 56,101 · R3 27,978 · R4 12,798
Studies with the most added values
| study | title | values | samples touched | samples in study | fields | routes |
|---|---|---|---|---|---|---|
| PRJEB11419 | American Gut Project | 18,850 | 6,947 | 7,353 | age_at_collection_days, collection_date, diet, health_condition, health_condition_detail, medication, smoking_status | R1 |
| PRJEB46788 | Codiversification of gut microbiota with humans | 8,817 | 2,750 | 2,750 | age_at_collection_days, country, health_condition, health_condition_detail, sex, subject_id | R1, R2 |
| PRJEB108612 | MOMmy-Microbiome_Epigenome_Neurodevelopment | 7,169 | 5,319 | 5,328 | subject_id, timepoint_label | R1 |
| PRJEB70237 | HELMi infant and parental stool WGS metagenomes | 6,748 | 2,597 | 2,664 | health_condition, health_condition_detail, timepoint_label | R1, R2 |
| PRJEB97686 | BMT CTN 1801 microbiome data | 5,262 | 2,631 | 2,631 | health_condition, health_condition_detail | R4 |
| PRJNA1468137 | Maternal influences on infant gut microbiome and health | 4,749 | 4,749 | 4,749 | collection_date | R1 |
| PRJEB49383 | Preterm Neonatal Stool Metagenomes | 4,688 | 2,344 | 2,351 | health_condition, health_condition_detail | R1 |
| PRJNA643353 | The gut microbiome related effect of Berberine and probiotics in treating Type 2 Diabetes | 4,637 | 1,191 | 1,192 | age_at_collection_days, antibiotic_exposure, bmi, intervention, sex, subject_id, timepoint_label | R1, R2 |
| PRJEB47383 | Personalized microbiome-driven effects of non-nutritive sweeteners on human glucose tolerance | 4,356 | 1,866 | 1,869 | intervention, subject_id, timepoint_label | R1 |
| PRJEB62690 | Infant stool, 5-HMO supplemented formula vs. control formula vs. breastfed | 4,071 | 1,110 | 1,110 | collection_date, health_condition, health_condition_detail, intervention | R1 |
| PRJNA1081952 | BRISC microbiome sub study | 3,921 | 1,422 | 1,422 | antibiotic_exposure, intervention, subject_id, timepoint_label | R1, R2 |
| PRJNA1370810 | Colon-delivered vitamin B2 as a functional modulator of the human gut microbiome | 3,784 | 1,032 | 1,032 | health_condition_detail, intervention, subject_id, timepoint_label | R1 |
| PRJNA398089 | Longitudinal Multi’omics of the Human Microbiome in Inflammatory Bowel Disease | 3,759 | 2,041 | 2,041 | age_at_collection_days, collection_date, timepoint_label | R1 |
| PRJEB37731 | Effects of the menstrual cycle and hormonal contraceptives on the human microbiome | 3,545 | 2,714 | 2,825 | medication, timepoint_label | R1 |
| PRJNA1280936 | Gut Microbiome of Infants in the Neonatal Intensive Care Unit | 3,544 | 895 | 895 | collection_date, health_condition, health_condition_detail, subject_id | R1 |
| PRJEB102033 | Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance | 3,404 | 1,860 | 1,877 | health_condition, timepoint_label | R1 |
| PRJEB83552 | SEPSIS Lactobacillus plantarum ATCC 202195 Microbiome Study | 3,348 | 1,674 | 1,674 | collection_date, location_site | R3 |
| PRJEB56830 | Isocaloric dietary protein intervention | 3,008 | 430 | 430 | antibiotic_exposure, health_condition, health_condition_detail, intervention, medication, medication_detail, subject_id, timepoint_label | R1, R3 |
| PRJEB111647 | Restoration of Microbiota in Newborns | 3,006 | 1,441 | 1,441 | age_at_collection_days, collection_date, intervention | R1 |
| PRJNA916952 | Stanford's Outcomes Research in Kids (STORK) Virome | 3,002 | 1,140 | 1,144 | age_at_collection_days, subject_id, timepoint_label | R1, R2 |
| PRJNA838575 | CHILD Infant Stool Raw sequence reads | 2,934 | 2,934 | 2,934 | timepoint_label | R1 |
| PRJNA1072081 | Identifying Biomarkers and Trajectories of Typical Neurodevelopment in Children, the BRAINRISE Initi | 2,883 | 961 | 961 | collection_date, subject_id, timepoint_label | R1 |
| PRJEB24771 | Legumes and Growth Data | 2,784 | 1,392 | 1,392 | collection_date, intervention | R1 |
| PRJDB41738 | Cross-sectional associations of lifestyle-linked microbial metabolites with metabolic syndrome and v | 2,684 | 1,342 | 1,342 | antibiotic_exposure, country | R3 |
| PRJNA1301887 | Preterm infant weight gain patterns are not associated with gut microbiome measures | 2,585 | 517 | 517 | collection_date, health_condition, health_condition_detail, subject_id, timepoint_label | R1, R3 |