What changed in R2026.21 (package 1.18.1, 2026-10-09)
69,406
sample × field values added (16,814 samples, 125 studies)
0
catalog studies added
0
registry studies added
Values added, by field
| field | values | samples | studies |
|---|---|---|---|
| health_condition_detail | 10,293 | 10,293 | 53 |
| health_condition | 10,225 | 10,225 | 57 |
| subject_id | 9,453 | 9,453 | 56 |
| collection_date | 9,072 | 9,072 | 75 |
| timepoint_label | 6,160 | 6,160 | 42 |
| antibiotic_exposure | 4,015 | 4,015 | 26 |
| sex | 3,151 | 3,151 | 19 |
| country | 3,000 | 3,000 | 18 |
| age_at_collection_days | 2,914 | 2,914 | 25 |
| location_locality | 1,990 | 1,990 | 11 |
| bmi | 1,829 | 1,829 | 20 |
| intervention | 1,140 | 1,140 | 15 |
| lifestyle | 977 | 977 | 2 |
| lifestyle_detail | 839 | 839 | 1 |
| location_site | 745 | 745 | 6 |
| latitude | 729 | 729 | 4 |
| longitude | 729 | 729 | 4 |
| medication | 598 | 598 | 5 |
| medication_detail | 525 | 525 | 2 |
| location_region | 458 | 458 | 5 |
| diet | 342 | 342 | 2 |
| smoking_status | 220 | 220 | 4 |
| intervention_detail | 1 | 1 | 1 |
| stool_consistency_bristol | 1 | 1 | 1 |
By route: R1 34,055 · R2 14,903 · R3 11,490 · R4 8,958
Studies with the most added values
| study | title | values | samples touched | samples in study | fields | routes |
|---|---|---|---|---|---|---|
| PRJEB38742 | Imidazole propionate is increased in diabetes and associated with dietary patterns and altered micro | 8,293 | 1,018 | 1,018 | age_at_collection_days, antibiotic_exposure, bmi, collection_date, country, health_condition, health_condition_detail, medication, medication_detail, sex, subject_id | R1, R2, R3 |
| PRJEB83236 | SEPSIS Human Microbiome Study | 7,302 | 839 | 1,609 | age_at_collection_days, collection_date, country, lifestyle, lifestyle_detail, location_locality, sex, subject_id, timepoint_label | R1, R2, R3, R4 |
| PRJEB62678 | BASIC: Biology, Affect, Stress, Imaging and Cognition in pregnancy | 5,134 | 926 | 926 | age_at_collection_days, bmi, collection_date, health_condition, health_condition_detail, subject_id, timepoint_label | R1 |
| PRJNA912122 | Lactulose-mediated Bifidobacteria expansion promotes a beneficial fecal metabolite profile that is a | 4,240 | 850 | 850 | collection_date, health_condition, health_condition_detail, subject_id, timepoint_label | R1, R4 |
| PRJEB86785 | The Antibiotic Resistance in the Microbiome – Oxford | 3,976 | 452 | 452 | antibiotic_exposure, collection_date, health_condition, health_condition_detail, location_region, location_site, sex, subject_id, timepoint_label | R1, R2, R3 |
| PRJEB63587 | A microbiota-directed therapeutic food for severely malnourished children evaluated following acute | 3,797 | 1,519 | 1,519 | health_condition, health_condition_detail, subject_id | R1, R3, R4 |
| PRJNA1277853 | PediCAP metagenomics and metaserotyping | 3,786 | 631 | 682 | collection_date, health_condition, health_condition_detail, latitude, location_locality, longitude | R1, R3 |
| PRJEB32631 | Early_life_microbiota_colonisation | 3,404 | 707 | 2,387 | age_at_collection_days, antibiotic_exposure, sex, subject_id, timepoint_label | R2 |
| PRJEB9403 | BAMBI__Baby_Associated_MicroBiota_of_the_Intestine_ | 2,972 | 1,486 | 1,486 | health_condition, health_condition_detail | R4 |
| PRJNA1128723 | Human gut metagenomes of South African infants | 1,875 | 429 | 429 | age_at_collection_days, antibiotic_exposure, collection_date, subject_id, timepoint_label | R1, R2, R3 |
| PRJNA588514 | viral metagenome Metagenome | 1,860 | 930 | 930 | health_condition, health_condition_detail | R4 |
| PRJEB11419 | American Gut Project | 1,607 | 328 | 7,353 | age_at_collection_days, antibiotic_exposure, bmi, country, diet, health_condition, health_condition_detail, medication, sex, smoking_status | R1 |
| PRJNA1249435 | Neurobiological and neurocognitive consequences of diverse microbiome functional trajectories | 1,588 | 794 | 1,109 | collection_date, subject_id | R1 |
| PRJEB60692 | The impact of exercise-induced muscle damage, inflammation and oxidative stress on the intestinal mi | 1,298 | 232 | 232 | antibiotic_exposure, intervention, lifestyle, sex, subject_id, timepoint_label | R1, R3 |
| PRJNA715245 | human gut metagenome Metagenome | 1,252 | 281 | 281 | antibiotic_exposure, country, intervention, subject_id, timepoint_label | R1, R3 |
| PRJEB75353 | Effects of a five-day hypocaloric and ketogenic diet on risk factors for cardiometabolic disease | 1,172 | 185 | 185 | antibiotic_exposure, collection_date, health_condition, health_condition_detail, intervention, subject_id, timepoint_label | R1, R2, R3 |
| PRJEB66487 | A microbiota-directed complementary food intervention improves stunting in undernourished Bangladesh | 1,125 | 225 | 225 | collection_date, health_condition, health_condition_detail, location_locality, timepoint_label | R1, R3 |
| PRJEB74035 | Long-term fasting remodels gut microbial metabolism and host metabolism | 961 | 241 | 241 | collection_date, intervention, subject_id, timepoint_label | R1 |
| PRJEB86881 | Deep shotgun metagenomics of the gut microbiome in Malawian adults | 900 | 450 | 450 | collection_date, subject_id | R1 |
| PRJNA256106 | Human gut Targeted Locus (Loci) | 872 | 109 | 109 | age_at_collection_days, collection_date, health_condition, health_condition_detail, location_site, sex, subject_id, timepoint_label | R1, R2, R3 |
| PRJNA504921 | viral metagenome Metagenome | 816 | 167 | 167 | age_at_collection_days, collection_date, health_condition, health_condition_detail, medication, medication_detail, sex, smoking_status | R1, R2 |
| PRJNA1372070 | Hepatocellular Carcinoma Cohort Metagenomics | 786 | 197 | 197 | antibiotic_exposure, collection_date, health_condition, health_condition_detail | R1, R2, R3 |
| PRJNA1160256 | The effects of selected food components and additives on the human gut microbiome | 636 | 120 | 120 | antibiotic_exposure, collection_date, health_condition_detail, smoking_status, subject_id, timepoint_label | R1, R3 |
| PRJNA1082417 | Gut Microbiome of Lactose Intolerant Individuals and healthy controls | 620 | 82 | 82 | antibiotic_exposure, bmi, collection_date, health_condition, health_condition_detail, location_locality, location_site, sex | R1, R2, R3 |
| PRJNA749138 | Homo sapiens Raw sequence reads | 484 | 121 | 121 | intervention, sex, subject_id, timepoint_label | R1, R2 |