What changed in R2026.23 (package 1.19.0, 2026-10-10)
201,308
sample × field values added (150,877 samples, 675 studies)
0
catalog studies added
0
registry studies added
Values added, by field
| field | values | samples | studies |
|---|---|---|---|
| subject_id | 115,362 | 115,362 | 577 |
| family_role | 32,090 | 32,090 | 88 |
| family_id | 30,368 | 30,368 | 81 |
| shared_setting_type | 9,806 | 9,806 | 45 |
| shared_setting_id | 9,107 | 9,107 | 42 |
| timepoint_label | 4,575 | 4,575 | 61 |
By route: R1 107,771 · R3 64,611 · R4 16,132 · R2 12,794
Studies with the most added values
| study | title | values | samples touched | samples in study | fields | routes |
|---|---|---|---|---|---|---|
| PRJEB108612 | MOMmy-Microbiome_Epigenome_Neurodevelopment | 14,125 | 5,328 | 5,328 | family_id, family_role, subject_id | R1 |
| PRJEB75464 | PREDICT 3 UK22A | 12,353 | 12,353 | 12,353 | subject_id | R3 |
| PRJEB75462 | PREDICT 3 US21 | 11,797 | 11,797 | 11,797 | subject_id | R3 |
| PRJEB51353 | Human gut metagenomes of SCAPIS Uppsala and Malmo | 9,819 | 9,819 | 9,819 | subject_id | R3 |
| PRJEB75463 | PREDICT 3 US22A | 8,469 | 8,469 | 8,469 | subject_id | R3 |
| PRJEB32762 | iMSMS Baranzini data | 5,476 | 1,369 | 3,765 | family_id, family_role, shared_setting_id, shared_setting_type | R1 |
| PRJEB45799 | The person-to-person transmission landscape of the gut and oral microbiomes | 5,073 | 2,380 | 2,394 | family_id, family_role, shared_setting_id, shared_setting_type | R2 |
| PRJNA1347413 | Metagenomic data from the ASPREE-XT study | 4,711 | 4,711 | 4,711 | subject_id | R1 |
| PRJNA1140720 | Modelling human microbiome transmission in a nursery setting | 4,470 | 1,152 | 1,163 | family_id, family_role, shared_setting_id, shared_setting_type | R1 |
| PRJEB83552 | SEPSIS Lactobacillus plantarum ATCC 202195 Microbiome Study | 3,348 | 1,674 | 1,674 | family_id, family_role | R1 |
| PRJEB83236 | SEPSIS Human Microbiome Study | 3,218 | 1,609 | 1,609 | family_id, family_role | R1 |
| PRJEB24771 | Legumes and Growth Data | 2,784 | 1,392 | 1,392 | shared_setting_id, shared_setting_type | R1 |
| PRJNA695570 | Human gut metagenomes of healthy mothers and their children | 2,745 | 1,767 | 1,767 | family_id, family_role | R1 |
| PRJEB70237 | HELMi infant and parental stool WGS metagenomes | 2,664 | 2,664 | 2,664 | family_role | R1 |
| PRJNA1357304 | Shotgun metagenomic sequencing of stool microbiomes relating to "Characterising the gut phageome and | 2,472 | 2,472 | 2,472 | subject_id | R1 |
| PRJNA916952 | Stanford's Outcomes Research in Kids (STORK) Virome | 2,288 | 1,144 | 1,144 | family_id, family_role | R1 |
| PRJNA1249435 | Neurobiological and neurocognitive consequences of diverse microbiome functional trajectories | 2,218 | 1,109 | 1,109 | family_id, family_role | R1 |
| PRJEB111647 | Restoration of Microbiota in Newborns | 2,168 | 1,441 | 1,441 | family_id, family_role | R1 |
| PRJEB91658 | COLO-COHORT: Exploring Gut Microbiome Associations of Colorectal Health and Early Colorectal Cancer | 1,970 | 1,970 | 1,970 | subject_id | R1 |
| PRJEB89491 | LucKi Gut - Longitudinal metagenomic sequencing of infant gut microbiota | 1,858 | 929 | 929 | family_id, family_role | R1 |
| PRJNA821542 | Longitudinal gut metagenomes from mothers and their infants in the EDIA study | 1,790 | 895 | 918 | family_id, family_role | R1 |
| PRJNA1235197 | Microbiome signatures linked to cancer and treatment adverse events in a real-world cohort | 1,651 | 1,651 | 1,651 | subject_id | R4 |
| PRJEB63587 | A microbiota-directed therapeutic food for severely malnourished children evaluated following acute | 1,520 | 760 | 1,519 | subject_id, timepoint_label | R1 |
| PRJNA698986 | Early-life metagenomes from human infant fecal samples with matched maternal sample | 1,366 | 683 | 819 | family_id, family_role | R1 |
| PRJDB41738 | Cross-sectional associations of lifestyle-linked microbial metabolites with metabolic syndrome and v | 1,342 | 1,342 | 1,342 | subject_id | R3 |