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Older adults (≥ 65 y)

Age bands · collection id elderly-samples

Every gut sample from subjects in the elderly age band (≥ 65 y at collection), across all studies.

Open in the sample explorer (29,302 samples)

379
studies with member samples
29,302
member samples in this release

Membership rule

age_categoryelderly
body_site_classprimary

Composition

Age category
elderly29,302
Country
US11,601
SE2,716
CN1,494
IE1,353
ES1,281
FR1,199
Health condition
healthy_control Healthy / control5,779
other_cancer Other cancer (incl. immunotherapy cohorts)2,753
neurological_psychiatric Neurological / psychiatric (PD1,219
other_disease Other disease / condition729
colorectal_cancer Colorectal cancer657
other_infection Other infection (HIV562
Lifestyle
institutionalized Institutionalized (nursing home884
urban_industrialized Urban / industrialized (only when stated by the source)484
rural_non_industrialized Rural278
indigenous_community Indigenous community (subsistence not specified)37
traditional_agriculturalist Traditional / subsistence agriculturalist17
vegetarian_or_vegan Vegetarian / vegan (cohort defined by this diet)1

Member studies (379)

StudyTitleMember samplesFirst public
PRJNA1347413Metagenomic data from the ASPREE-XT study4,7112025
PRJEB110772Gut microbiota associates with frailty in older women2,3982026
PRJNA1157371AWI-Gen 2 Microbiome Project1,8202025
PRJNA1370810Colon-delivered vitamin B2 as a functional modulator of the human gut microbiome1,0322026
PRJEB104496The Ageing Imageomics Study9422026
PRJNA1235197Microbiome signatures linked to cancer and treatment adverse events in a real-world cohort7072025
PRJNA1305379Fecal immunochemical tests from population-based colorectal cancer screening programs support prospective microbiome cohorts6552026
PRJEB11419American Gut Project6442015
PRJNA1086951MIND Study - Fecal Metagenomics6382025
PRJNA1237248MicroN Study Prescient data5002025
PRJNA529586Alzheimers Disease microbiome in elders4902020
PRJNA834801Characterizing dysbiosis of the Parkinson's disease gut microbiome using shotgun metagenomics4692022
PRJEB32762iMSMS Baranzini data3422019
PRJNA1167328Gut Microbiome Signatures Predict Long COVID2932026
PRJEB64515Gut Microbiome Dynamics and Predictive Value in Hospitalized COVID-19 Patients: A Comparative Analysis of Shallow and Deep Shotgun Sequencing2922023
PRJNA675598Identification of unique bile acid metabolizing bacteria from the microbiome of centenarians2862021
PRJDB4176metagenomic data from human fecal samples2702019
PRJEB113070Longitudinal metagenomics analysis of CPE carriers2672026
PRJNA1023797Custom scoring based on ecological topology of gut microbiota associated with cancer immunotherapy outcome.2572024
PRJNA613947human gut metagenome Metagenome2542020
PRJNA987980Microbiome Pipeline Benchmarking2402024
PRJEB49124Gut metagenomes of Asian octogenarians from SG90 cohort2342021
PRJNA589866human gut metagenome Metagenome2142020
PRJNA297252Intestinal microbiota dynamics in hospitalized patients2132015
PRJEB37017Identifying frailty-associated markers in Elderly Irish Individuals2072020
PRJEB83322The gut microbiome, frailty syndrome and comorbidities: a complex network in aging2032025
PRJEB76236MaPLE insights into microbiome and metabolome.2002024
PRJNA1177009A human milk oligosaccharide alters the microbiome, circulating hormones, cytokines and metabolites in a randomized controlled trial of older individuals1862024
PRJEB38742Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology1852020
PRJEB54704Gut microbiome associations with clinical outcomes of CD19-targeted CAR-T cell immunotherapy1772023
PRJNA751792Intestinal Akkermansia muciniphila predicts clinical response to PD1 blockade in advanced non-small cell lung cancer patients1752021
PRJNA798058The gut microbiome in preclinical Alzheimer Disease1642022
PRJNA1116523Microbial and metabolic gut profiling across seven malignancies identifies fecal Faecalibacillus intestinalis and formic acid as commonly altered in cancer patients1562024
PRJEB47976Alzheimer signature in intestinal microbiome: Results from the AlzBiom study.1522022
PRJDB40001Human gut metagenome from the elderly population in Ginowan City, Okinawa1482026
PRJNA1142892Microbiome modulators in the prevention and mitigation of accelerated aging biology caused by cancer treatment1482025
PRJEB1786Gut metagenome in European women with normal, impaired and diabetic glucose control1452013
PRJNA531316CARBEPAD1442019
PRJEB72531Prebiotic intervention for muscle function and cognition1372024
PRJEB72524Gut microbiome samples from a cohort of CRC patients in Brno, Czech Republic.1252025
PRJNA954584The gut microbiome in bullous pemphigoid1242023
PRJNA739858Gut microbiome analysis of the Brain, Adipocyte, Microbiome, Muscle, Bone, Exercise (BAMMBE) elderly Singapore Cohort1212022
PRJNA699281The microbiome of aging: instability, heterogeneity, and pathogenicity reservoirs in the skin, oral, and gut microbiome of older adults1202022
PRJNA1210004Temporal Stability of the Fecal Microbiome in Older Adults1202025
PRJDB15956Shotgun data in the gut of Parkinson's disease1152023
PRJEB21528Here we performed a metagenome-wide association study (MWAS) on stools from 218 individuals with atherosclerotic cardiovascular disease (ACVD) and 187 healthy controls.1042017
PRJNA745329Fecal and colon mucosa sequencing of tubular adenoma, serrated, and polyp-free individuals1002021
PRJNA542578human gut metagenome Raw sequence reads1002024
PRJNA1195999Gut Microbiome Dynamics and Functional Shifts in Healthy Aging1002025
PRJEB115441Shotgun gut metagenomes for multi-ethnic Asian adults to investigate obesity, diet, and microbiome relationships (HELIOS Singapore cohort)982026
PRJNA598452Elderly Gut Microbiota FMM972020
PRJEB7774Gut microbiome development along the colorectal adenoma-carcinoma sequence962015
PRJEB43119Predicting Response to Immunotherapy for Melanoma With Gut Microbiome and Metabolomics952021
PRJEB22863Gut mictobiota composition correlation with the clinical outcome of NSCLC and RCC patients treated with anti-PD-1 mAB942017
PRJNA1056768Relationships between the gastrointestinal microbiome and Clostridiodes difficile toxin production and expression882025
PRJDB16443Shotgun metagenome sequencing of oral and stool samples from Japanese long-term care facility residents872023
PRJNA770295Dietary fiber and probiotics impact the gut microbiome and melanoma immunotherapy response842021
PRJNA530339Shotgun Metagenomics of 361 post-menopause women reveals gut microbiome change along with the bone loss842020
PRJEB6070Potential of fecal microbiota for early stage detection of colorectal cancer832014
PRJNA672867Effectiveness of Fecal Microbiota Transplant together with PD-1 blockade in overcoming resistance to anti-PD-1 therapy in advanced melanoma patients822020
PRJNA615162Gut Microbiome characterization of IgG4 patients and Systemic Sclerosis patients822021
PRJNA665245Gut-Brain axis in people at differential genetic risk for developing Alzheimer's disease812022
PRJNA1046438Profiling the gut microbiota throughout human lifespan802024
PRJNA531921Human Gut Metagenome Raw sequence reads792019
PRJNA1491285Gut microbiota in patients with cirrhosis and portal hypertension receiving lactulose792026
PRJNA904419A metagenomics study reveals the gut microbiome as a sex-specific modulator of healthy aging in Hainan centenarians752023
PRJNA957107Imrabiome - Rheumatoid project752024
PRJNA1295573The intestinal microbiome of patients with newly diagnosed invasive breast cancer and ductal carcinoma in situ742026
PRJNA1390647Gut Barrier Dysfunction, Inflammation, and Cognitive Impairment in Aging732026
PRJNA734860Stool microbiome of Hispanics in the Cameron County Hispanic Cohort722023
PRJEB9576Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut Microbiome722016
PRJNA347511Shotgun sequencing of the gut microbiome to look at vitamin K biosynthesis712020
PRJNA624763Shotgun metagenomics of human gut microbiota in China high longevity area682020
PRJNA1450325Metagenomes of fermented foods and gut microbiome from non Western populations672026
PRJNA762360Intestinal Microbiota Signatures Predict Clinical Outcome and Immune-related Adverse Events in PD-1 Treated Melanoma Patients662022
PRJNA728374Gut microbiome responses to dietary intervention with hypocholesterolemic vegetable oils.662022
PRJNA1248002Comparison of 95% ethanol and cards for stool metagenomic studies642025
PRJNA993675Discovery of disease-adapted bacterial lineages in inflammatory bowel diseases622024
PRJNA791751Immune system and intestinal microbiota determine efficacy of androgen deprivation therapy against prostate cancer612022
PRJNA398089Longitudinal Multi’omics of the Human Microbiome in Inflammatory Bowel Disease612017
PRJNA1258611Comparing a Whole Grain Blend with Polished White Rice on Gut Microbiota Fermentation in Diabetic Patients602025
PRJNA447983Whole-metagenome shotgun sequencing of two Italian fecal CRC cohorts592018
PRJNA565546fecal sample Raw sequence reads572019
PRJEB53403PD Shotgun Metagenomics Data562022
PRJEB114255IBD Parisian Gut Microbiome Cohorte562026
PRJEB72525Gut microbiome samples from a cohort of CRC patients in two hospitals in Prague and Plzen, Czech Republic.562025
PRJNA1138254PSC-Vanc Clinical Trial552024
PRJNA749645Whole genome metagenome of gut microbiota from prostate cancer patients552021
PRJNA1453174Gut microbiome of subjects with either gastric cancer or gastritis542026
PRJNA1291832Shotgun metagenomics data of melanoma patients undergoing ICB542025
PRJNA993161Impact of complex oligosaccharides and a probiotic on the antibiotic-treated human microbiome542023
PRJNA397450Human gut microbial community assessment using stool, rectal swab, and mucosal samples512017
PRJDB38277Characteristics of intestinal bacteria in long-lived elderly (PRJCA019954)512025
PRJNA1088844Characterization of the fecal microbial taxonomic composition and functional potential and integrative analysis with gastrointestinal and non-gastrointestinal symptoms in subjects with disorders of gut-brain interactions502024
PRJNA1198725Human gut metagenome492025
PRJEB72523Gut microbiome samples from the AtezoTRIBE phase-II clinical trial482025
PRJNA1107274Neoadjuvant Vidutolimod and Nivolumab in High-Risk Resectable Melanoma482024
PRJEB53401PD Shotgun Metagenomics - TBC482022
PRJEB10878Metagenomic analysis of fecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer482015
PRJEB39661Changes in the microbiota across life: the existence of a core of microbial taxa and decoupling taxa.452023
PRJNA972625Changes in gut mycobiome in Polish melanoma patients452024
PRJNA728680PREMIX442022
PRJNA928744Gut microbiota composition of patients in MIMic cohort442023
PRJNA918651Characterizing the microbiome of patients with myeloproliferative neoplasms during a Mediterranean diet intervention442023
PRJNA762484Gut microbiota in patients with Parkinson disease432022
PRJNA1096686A comparative analysis of Parkinson's disease, inflammatory bowel disease, and control gut microbiomes with shotgun metagenomics432024
PRJEB59450PDA-MAPS - Pancreatic Ductal Adenocarcinoma - Microbiome As Predictor of Subtypes - Fistula422023
PRJNA688274Netherland Travelers422021
PRJEB25514A cross-sectional study of compositional and functional profiles of gut microbiota in Sardinian centenarians422019
PRJNA811494ITS2 and whole metagenomics from stool of human lung cancer patients from hungary412023
PRJEB12449Reproducibility of associations between the human gut microbiome and colorectal cancer assessed in a patient population from Washington, DC, USA412016
PRJEB81519Effects of a Fiber Mixture on Gut Microbiome Diversity and Short-Chain Fatty Acids in Adults with Increased Metabolic Risk: A Randomized Cross-over Study412025
PRJNA1216426The effects of probiotic treatment with Bifidobacterium breve, Bif195 for small intestinal Crohn's disease and the gut microbiome: Results from a randomised, double-blind, placebo-controlled trial402025
PRJNA679346Whole-metagenome shotgun sequencing of human feces402021
PRJNA1255639Gut microbiota of SIRS and sepsis patients402026
PRJNA1258750Whole genome sequencing of gut microbiota in cognitively frail and robust older adults from the AGELESS Cohort402025
PRJNA422434A metagenome-wide association study of gut microbiota in type 2 diabetes.402012
PRJEB49516Role_of_microbiome_in_rare_cancers_in_Australia392024
PRJNA895487Multi-omic gut microbiomes of autistic children and their typically developing siblings392023
PRJNA928211Gut microbiome of DLBCL patients392023
PRJNA731589Metagenomic sequencing of microbial DNA extracted from stool samples of CRC and HS382022
PRJNA962059Lewy Body Dementia Microbiome382024
PRJNA934363Phageomes from human stomach382023
PRJNA804384Inflammatory bowel disease patients undergoing biological therapy382022
PRJNA573963Gut Microbiome of Elderly Adults with Advanced Dementia382019
PRJNA1446200Matched Metagenomic and Metatranscriptomic Profiling of CDI382026
PRJEB52923One-year supplementation with Lactobacillus reuteri ATCC PTA 6475 counteracts a degradation of gut microbiota in older women with low bone mineral density382022
PRJEB54724Netherlands Norovirus surveillance, metagenomics, 2015-2019382023
PRJNA928758Microbiome in Liver Transplant Infections372023
PRJNA909223Study of microbiome alterations in hospitalized COVID-19 patients and non-infected controls352024
PRJNA449784human gut metagenome Raw sequence reads352019
PRJEB42013Non-invasive, robust and specific fecal microbiota-based screening for the early detection of PDAC.352022
PRJNA986283Understanding Gut Microbiome's Impact on Osteoporosis332023
PRJNA850529Host factors associated with gut mycobiome structure332023
PRJNA541981Gut microbiome in melanoma patients332019
PRJNA1152927Alterations in the gut microbiota and metabolite profiles of patients with community-acquired pneumonia322024
PRJNA1130699Whole metagenomic shotgun sequencing on fecal samples of NSCLC patients who received ICB treatment322024
PRJNA1438274Proximity-ligation metagenomics of rCDI and Cirrhosis Patients322026
PRJNA842425Alterations of the Microbiome During Critical Illness with short and long term clinical outcomes322022
PRJNA1299468Gut Bacteria and Parkinson's disease312025
PRJNA1398904Enterococcus faecium Driven Metabolic Dysbiosis is Linked to Mortality following Liver Transplant312026
PRJNA1001944Breast cancer but not the menopausal status is associated with small changes of the gut microbiota312024
PRJNA1111312Shotgun metagenomics reveals Bacteroides stercoris as a fecal biomarker depleted in late-stage hepatocellular carcinoma302024
PRJEB11532Towards personalized nutrition by prediction of glycemic responses302015
PRJNA1065874Gut microbiome associated with gastric cancer and chronic gastritis292024
PRJNA273574Intestinal model Metagenome292015
PRJNA400072Gut microbiome structure and metabolic activity in inflammatory bowel disease292018
PRJNA1160256The effects of selected food components and additives on the human gut microbiome282025
PRJNA642308Gut microbiome of subjects with inflammatory bowel disease undergoing diet intervention282021
PRJEB76849Gut microbiome alterations in Alzheimers disease _WF-BEAM282024
PRJNA672125Bugs and Bones282021
PRJNA1026631Female Urogenital & Rectal Microbiomes of Individuals with UTI Symptoms Metagenome272023
PRJNA862629Segamat Resistome Profiling262023
PRJNA1210837Metagenomic sequencing of gut virus in heart failure patients262025
PRJNA1229669Gut microbiome shotgun metagenome data from DLBCL patients receiving CAR-T therapy252025
PRJNA381333Tibetan Gut Miicrobiota Metagenome252018
PRJNA944152sMadCam-1 associations with the gut microbiome in NSCLC cancer patients252023
PRJNA1300320Association of metabolic pathways and antibiotic resistance gene dynamics with SARS-CoV-2 vaccine efficacy in PLWH252026
PRJNA797994Gut Microbiome of Helminth Infected Indigenous Malaysians Is Context Dependent252022
PRJNA343008feces metagenome Raw sequence reads242018
PRJNA973824Immunoregulatory role of gut microbiome and mycobiome in aging242024
PRJEB112132Family cohort with central areolar choroidal dystrophy242026
PRJNA788670Effects of high-intensity interval training and moderate-intensity continuous training on gut microbiome in overweight and obese older adults242022
PRJNA1236664Intestinal dysbiosis promotes gut permeability and neurological sequelae in individuals with long COVID via gut microbiota-derived extracellular vesicles232025
PRJEB13835Age-related macular degeneration is associated with alterations in the gut microbiome232017
PRJNA487636An increased abundance of Clostridiaceae characterizes arthritis in inflammatory bowel disease and rheumatoid arthritis: a cross-sectional study232018
PRJNA1475489Brain Health and the Gut Microbiome (bMicrobiome Study)222026
PRJNA397906Metagenomic shotgun sequencing of gut microbiomes of melanoma patients receiving immune checkpoint inhibitor therapy222017
PRJEB27928Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer.222018
PRJNA524170Resistant microbiome underlies antibiotic therapy in pouchitis212019
PRJDB20343Shotgun metagenome sequencing of oral and stool samples from colorectal cancer patients before and after administration of antibiotic prophylaxis for surgery212025
PRJEB57228Dietary intervention of people with Parkinson's disease212024
PRJNA429097Microbiota Research on Chinses Colorectal Cancer202019
PRJEB62571Changes in the microbiota across life: the existence of a core of microbial taxa and decoupling taxa.202023
PRJEB6337Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. Previous studies have shown an association between the gut microbiota and liver complications such as cirrhosis and other liver injuries. We therefore undertook a whole gut microbiome wide association study of stool samples from 98 liver cirrhosis patients and 83 healthy controls to characterise the faecal microbial communities and their functional composition. In total, we generated 860 Gb of high-quality sequence data and built a reference gene set for the liver cirrhosis cohort containing 2.69 million genes, 36.1% of which was not covered by previously published gene catalogues.202014
PRJEB21612Alterations of the gut microbiome in hypertension202022
PRJNA598446A Predictive Index for Health Status Using Species-level Gut Microbiome Profiling192020
PRJNA822660Profiling the human intestinal environment under physiologic conditions192023
PRJNA1145581Gut Microbiome profile of Lynch syndrome mutations192025
PRJNA484031Faeces Genome sequencing192019
PRJNA389927Viral and Bacterial Communities of Colorectal Cancer192017
PRJNA984213Evaluation of the persistence of Bifidobacterium longum subsp. longum in the human gut across the entire life span192023
PRJNA687957Gut Microbial Determinants of Clinically Important Improvement in Patients with Rheumatoid Arthritis192021
PRJNA624223Gut microbiome alterations and longitudinal kinetics in COVID-19 patients182020
PRJNA905672Metagenomic data of gut microbiome from tunisian CRC patients182023
PRJEB77410Metagenome description of patients with diarrhea from hospitalization and emergency room services of Hospital Universitario Mayor Mederi182024
PRJNA943491Colorectal RNA182023
PRJEB91718COVID-19 Microbiome - deep samples182025
PRJNA1056258The Role of Akkermansia muciniphila in Luminal Cholesterol Metabolism182023
PRJNA342339Metagenome of fermentation model samples inoculated with human feces182016
PRJEB68381Pancreatitis - Microbiome As Predictor of Severity P-MAPS172023
PRJNA669585The gut-muscle axis in primary sarcopenia: a proof of concept study exploring human fecal microbiota composition and function with shotgun metagenomics sequencing172023
PRJNA1125469Longitudinal Gut Metagenomics profiling of ME/CFS172025
PRJNA1263414Human gut metagenome from melanoma patients172025
PRJNA1404669Microbiome-Gut-Brain Axis Biomarkers Associated with Brain Health in those with History of Traumatic Brain Injury: A US-VMP Study172026
PRJNA1155319Characterisation of the gut and oral microbiome during SARS-COV-2 infection172025
PRJNA690543Human Gut Microbiomes from Burkina Faso172021
PRJNA850128Gut microbiota dysbiosis is associated with sepsis-induced cardiomyopathy in patients162023
PRJNA300541Antibiotic resistance exchange between microbiota in resource-poor settings in Latin America162016
PRJNA588035Cross-sectional study of intestinal flora in Parkinson's patients in central China162021
PRJEB1220A method for identifying metagenomic species and variable genetic elements by exhaustive co-abundance binning162014
PRJNA751448gut microbiome of Myalgic Encephlomyelitis/Chronic Fatigue Syndrome patients162021
PRJEB108450Exploring Fecal Microbiome in the CHILD COVID-19 sub-project162026
PRJNA996050Fecal metagenomic profiling of vermiform appendix from adult patients with pancreatic or colon cancer162023
PRJEB123871Microbiome‐Based Modeling of CAR‐T Therapy Response in Lymphoma: Insights From Shotgun Metagenomics Sequencing152026
PRJNA384246Studies of metagenomes of inflammatory bowel disease patient receiving vedolizamub therapy152019
PRJNA129452116S sequencing of MASLD patient fecal samples152025
PRJNA809514Shorgun metagenomics of T2DM human gut microbes treated with GLP-1 drug152022
PRJNA297269Fecal microbiota of hospitalised Elderlies with and without Peptoclostridium difficile infection metagenome152016
PRJNA649273KiSMi Kidney stone patients - gut samples152020
PRJNA637365Dysbiosis in metabolic genes of the gut microbiomes of patients with a Pouch152021
PRJNA547591Cameroon, U.S. fecal V4 amplicon sequencing of 16S rRNA and shotgun sequencing152020
PRJNA629755Microbiome Signatures of Cavernous Angioma142020
PRJEB106095Hi-C and VLP sequencing data of SPMP cohort142026
PRJNA389280Human gut metagenome and metatranscriptome in the inflammatory bowel disease (iHMP/HMP2)142017
PRJNA503909Torres Strait Islands Health Surveys, 2016142020
PRJEB115114Gut microbiota analysis in FMF, CAPS, and MKD142026
PRJEB81804Host depletion in pig and human colon samples142024
PRJEB110936Comparative Analysis of Urinary, Bladder Tissue, and Stool Microbiota in Bladder Cancer Using Shotgun Metagenomics132026
PRJNA1113191Gut microbiome analysis of health screening participants at Seoul National University Hospital132025
PRJEB46788Codiversification of gut microbiota with humans132022
PRJEB2054A human gut microbial gene catalog established by deep metagenomic sequencing132010
PRJNA685168Multi-omics suggest diverse mechanisms for response to biologic therapies in IBD122021
PRJNA626477human gut microbiota Raw sequence reads with and without cancer cachexia122021
PRJNA451097Metagenome shotgun sequencing of human gut microbiota and metabolic syndrome122022
PRJDB10829Generic sample from human gut metagenome122022
PRJNA1367514Shotgun metagenomic sequencing of fecal specimens from 30 paired human sample122025
PRJNA1240691Gut metagenome122025
PRJDB16532Generic sample from human gut metagenome122024
PRJNA1157583metagenome Raw sequence reads122025
PRJNA356225human gut metagenome Metagenome122016
PRJEB37898MDROs and gut microbiota in a nursing home122020
PRJEB42155UCSD IBD 200 Patient Cohort Multi-omic Project122023
PRJEB43611Changes in gut microbiota during balneotherapy122022
PRJEB45799The person-to-person transmission landscape of the gut and oral microbiomes112022
PRJNA1221292Plasma Exosomal miRNA Expression and Gut Microbiota Dysbiosis Are Associated with Cognitive Impairment in Alzheimer's Disease.112025
PRJNA504921viral metagenome Metagenome112019
PRJNA1056456Homo sapiens Metagenome112024
PRJNA217052Fiji COMP112015
PRJEB95899Metagenomic Analysis of the Human Gut Virome Reveals Functional Signatures and Viral Stability in Diarrheal and Non-Diarrheal Individuals112025
PRJEB28097(1) Personalized microbiome and host features resist gut mucosal colonization by empiric probiotics (2) Post-antibiotic gut mucosal microbiome reconstitution is impaired by probiotics and improved by autologous FMT112018
PRJNA413659Shifts of the intestinal microbiota and resistome caused by Helicobacter pylori eradication therapy112017
PRJEB76817WMGS data from two-year, two-arm, randomized clinical trial comparing first-line antiretroviral therapy including dolutegravir vs. ritonavir-boosted darunavir in subjects with very advanced HIV-1 late presentation.102024
PRJNA1028158Metagenomics-Seq of human intestinal mucosa102023
PRJDB17048Japanese Lynch Syndrome Gut Microbiome102024
PRJNA1222800Fecal metagenomes from patients with HER2-negative metastatic breast cancer102025
PRJNA628604Oral capsulized Fecal microbiota transplantation for eradication of carbapenemase-producing Enterobacteriaceae colonization with a metagenomic perspective102020
PRJNA397219Gut metagenomes of patients with colorectal cancer102017
PRJNA914091Evaluation of a shotgun metagenomics approach for detection of ESBL- and/or carbapenemase-producing Enterobacterales in culture negative patients recovered from acute leukemia92023
PRJNA736213Profiling the gut microbiota of Amyotrophic Lateral Sclerosis (ALS) patients92021
PRJNA1091163Vitamin D92024
PRJEB27005Gut metagenomes of rural populations in Cameroon92019
PRJNA970820human gut metagenome Genome sequencing and assembly92023
PRJNA707487Metagenomic sequencing of stool samples from human hematopoietic cell transplantation patients92021
PRJNA1169096Donor Composition and Fiber Promote Strain Engraftment in a Randomized Controlled Trial of Fecal Transplant with Dietary Fiber for Ulcerative Colitis (MINDFUL)92025
PRJNA1203401Gut microbiota predicts treatment response to empagliflozin among MASLD patients without diabetes mellitus92025
PRJNA698459Fasting alters the gut microbiome with sustained blood pressure and body weight reduction in metabolic syndrome patients92021
PRJNA314481Bacteria and human colon samples from human gut Metagenome92016
PRJNA298362Functional dynamics of the elderly gut microbiome during probiotic consumption92015
PRJNA531273Association of Flavonifractor plautii, a flavonoid degrading bacterium, with the gut microbiome of colorectal cancer patients in India92019
PRJNA1469454Human gut metagenome from melanoma patients collected at two timepoints82026
PRJNA845905Donor Specific Antibodies and the Microbiome in Heart Transplant Patients82022
PRJNA1263627Linking Gut Microbiome to HIV-1 Reservoir Size in People Living with HIV82025
PRJNA826552human gut metagenome Raw sequence reads82022
PRJNA353598viral metagenome Metagenome82017
PRJNA4913353G low-gluten cross-over trial - faeces metagenome data82018
PRJNA703034Metagenomics of Stool from ICU Patients82022
PRJNA786875Intestinal virome in alcohol use disorder and abstinence Raw sequence reads82022
PRJNA929558Sulfasalazine therapy for IBD-associated pSpA82023
PRJNA912151Characterization of the gut microbiome in NH Bhutanese refugee adults72022
PRJNA608022human viral metagenome Raw sequence reads72020
PRJNA486009Genome diversity of pathogenic Escherichia coli in Ecuador72019
PRJNA1356643Profiling the gut microbiota with Saudi healthy aging72025
PRJEB70916Whole Metagenome Sequencing of colo-rectal cancer in Lynch Syndrome Patients72024
PRJNA1209849Gut metagenomics Raw sequence reads72025
PRJNA176385Human gut microbiome of Russian population72013
PRJNA878603Multi-omics of host-microbiome interactions in short- and long-term Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS)72023
PRJNA705217Gut metagenomes of patients with post-infection irritable bowel syndrome72022
PRJNA308846Human Faecal Samples Raw sequence reads62016
PRJNA1181655Fecal shotgun microbiome P4O2 COVID-1962026
PRJEB3085Disturbance of the gut microbiota during antibiotic stress (therapy): a multi-omic approach62013
PRJNA479838human stool Raw sequence reads62018
PRJNA289586Human Gut Microbiome in a Multiplex Family Study of Type 1 Diabetes Mellitus62016
PRJNA1416570gut microbiota and metabolites62026
PRJDB14457Gut microbiota of healthy Japanese adult62025
PRJNA520777WGS sequencing of gut microbiome from patients receiving warfarin therapy52020
PRJEB49168Singapore Platinum Metagenomes Project52021
PRJNA1192958Human gut microbiome of healthy and T2D cohorts of India52026
PRJNA431482human gut metagenome Metagenome-Behcet's disease52018
PRJNA792726Integrated analysis of gut microbiome and host immune responses in COVID-1952022
PRJEB6997Gut and Oral Microbiome Dysbiosis in Rheumatoid Arthritis52015
PRJNA521587Gut microbiome in individuals with fibromyalgia - WGS52019
PRJNA401385Human gut microbiota Raw sequence reads52017
PRJNA806955metagenomics for IPH patients52022
PRJNA689476Metagenomic Sequencing of Bacteria from Subjects with CD and AS52022
PRJNA1090271Whole Genome Metagenomics of Human Fecal Sample: Melioidosis52025
PRJEB55787Associations of the Intestinal Microbiome and HLA-B27-associated anterior uveitis52025
PRJNA685797The Influence of the gut microbiome on BCG-induced trained immunity52021
PRJNA685581hyptertensive gut metagenome in patients and mice52023
PRJNA591064Gut microbiota composition associated with Clostridium difficile-positive diarrhea and C. difficile type in ICU patients52020
PRJNA1464200The human gut microbiota of patients with brucellosis spondylitis52026
PRJNA1269031Randomised, clinical trial: Eight weeks of treatment with probiotic Bifidobacterium breve, Bif195 lowers fatigue scores in patients with diarrhoea-predominant irritable bowel syndrome52025
PRJNA299502Human Gut Microbiome Metagenome52015
PRJNA1195215Human gut metagenome42025
PRJEB48663Increasing the diversity of dietary fibres in a daily-consumed bread modifies gut microbiota and metabolic profile in subjects at cardiometabolic risk42021
PRJNA414153Human Appendix Microbiome42017
PRJNA768833Metagenomic Sequencing of Rural Kenyan Fecal Samples42022
PRJEB39813A metagenomic study of the oral (saliva) and Gut (stool) microbiome in subjects with Crohn's Disease.42021
PRJNA498332Comparison of faecal virome composition in cystic fibrosis patients vs. a healthy cohort42018
PRJEB42151Metaomics Reveals Microbiome Based Proteolysis as a Driver of Ulcerative Colitis Severity42020
PRJNA686769Altered enteric virome in rheumatoid arthritis42025
PRJNA698223TD Cusco travelers study42022
PRJNA718195Hi-C metagenomics of gut microbiome in chronically critically ill patients42021
PRJEB46778Fecal Microbiota Transplantation for Metabolic Syndrome42022
PRJNA682730human gut microbiome predicts response to MTX treatment42021
PRJNA767321Human small intestine metagenomes from a pilot study on segmented filamentous bacteria32021
PRJNA557323Human gut metagenomes from Hong Kong populations32020
PRJNA939026Gut microbiota associated with Lynch syndrome in Druze communities in Israel32023
PRJDB5860Asian Microbiome Project32025
PRJNA600269Dysbiosis-induced Secondary Bile Acid Deficiency Promotes Intestinal Inflammation (shotgun metagenomics)32020
PRJEB33500Mediterranean diet intervention in overweight and obese subjects leads to multiple beneficial shifts in gut microbiome and metabolome independently from energy intake32020
PRJNA1260161Homo sapiens1 Raw sequence reads32025
PRJNA725613colorectal gut microbiota32021
PRJNA638405Ecological and evolutionary alteration in the GD intestinal microbiome part07 Metagenome32020
PRJEB122858Disrupted Terminal Bilirubin Catabolism Links Lachnospiraceae Depletion to Inflammatory Bowel Disease32026
PRJNA494824Gut metagenomic raw sequence reads of cancer patients32019
PRJNA634145human metagenome Raw sequence reads32021
PRJDB18854Gut microbiota of healthy Japanese adult32025
PRJEB97162Engraftment of donor phageome via fecal microbiota transplantation in recurrent C. difficile infection32025
PRJNA890008Altered infective proficiency of the gut microbiome in COVID-1922022
PRJEB50260Hyperbaric Oxygen Therapy for Ulcerative Colitis22022
PRJEB33098Colonbiome pilot: 9 stools, sequenced by shotgun22019
PRJEB55648multi bodi site study of Bolivar amerindian microbiome22023
PRJNA362284human gut metagenome PacBio Raw sequence reads22019
PRJNA833034Integrated metagenomics and metabolomics analysis illustrates the systemic impact of the gut microbiota in patients with craniopharyngioma22022
PRJEB36820Investigating the health status and microbiota in members of the Irish Travelling community22020
PRJNA666684A metagenomic study of CVID in humans22021
PRJNA600008Dysbiosis-induced Secondary Bile Acid Deficiency Promotes Intestinal Inflammation22020
PRJNA1356513Dieta Anti-INflamatoria (DAIN) study22025
PRJDB17221Horizontal gene transfer shapes pathogenic bacteria in multiple sclerosis_fecal metagenome22024
PRJNA1300398Impact of dolutegravir on the gut microbiome and metabolic pathways in PLWH22026
PRJNA638403Ecological and evolutionary alteration in the GD intestinal microbiome part05 Metagenome22020
PRJNA1285573Homo sapiens1 Raw sequence reads22025
PRJNA656577Effect of methotrexate on human gut microbiota22021
PRJEB12124Gut microbiome-dependent stratification of patients for anti-diabetic treatment22016
PRJNA988170human gut metagenome Raw sequence reads22025
PRJDB5180A metagenomic approach for acute cholecystitis patients enables pathogen detection and rapid diagnostics22017
PRJDB7767Gut Microbiota dysbiosis leads to the development and progression of multiple sclerosis22020
PRJNA725020Fecal Metagenomes22021
PRJEB113836Resistome and microbiome-immune interactions in an Eastern European population with high antibiotic use22026
PRJNA1150764Integrated gut microbiome and metabolomics to the effects and mechanisms of the addition of Naoxintong capsule to atorvastatin in the treatment of hyperlipidemia22024
PRJNA1125836Gut microbiome obesity index, a new analytical part of the metagenomics workflow to evaluate gut dysbiosis in obese humans22024
PRJNA397112Indian Human Gut Microbiome12018
PRJNA445968Innate, Transcriptomic, and Microbiomic Correlates of Tuberculosis Infection and Disease12018
PRJNA929328MetGut: ONT Sequencing of Stool Samples in alloHSCT patients12023
PRJEB34333The metagenomic analysis of formalin-fixed paraffin-embedded tumour and distal tissue from colorectal cancer patients reveals differences in the microbiome12021
PRJNA375935human gut Metagenome12017
PRJNA278393Metagenome sequencing of the Hadza hunter-gatherer gut microbiota.12015
PRJNA356102human gut metagenome in RA12016
PRJNA714678Metagenomic analysis reveals the signature of gut microbiota associated with human chronotypes12021
PRJNA1521563A hospital cluster of human astrovirus MLB infection with a fatal case associated with Rotavirus C coinfection12026
PRJNA1475610Shotgun metagenomic profiling of the gut microbiome in type 2 diabetes mellitus and healthy controls12026
PRJNA1405914Gut microbiota-derived 5-hydroxyindoleacetic acid drives macrophage-dependent cardiac remodeling through the AHR-NFATC2-ITGA4 axis12026
PRJNA1320802A key microbiota triggering emotional disorders in IBS.12026
PRJNA1289665The human intestinal metagenome12025
PRJNA307231Human feces metagenome 16s rDNA sequencing12018
PRJNA312222Genome reconstructions from human gut metagenomes12016
PRJNA686265Gut microbiome-mediated metabolism effects on immunity in rural and urban African populations12021
PRJNA520743WGS sequencing of gut microbiome from patients receiving warfarin therapy（Supplementary）12020
PRJNA904560Essential tremor triggered by reduction of gut bacterial-derived GABA is ameliorated by supplementary of high GABA-producing Lactobacillus plantarum L512023
PRJNA1088414Microbiome changes during stem cell transplantation12024
PRJNA1030952Single-cell and metagenome sequencing for human oral/gut microbiome12023
PRJNA353560Human gut microbiome in AS12016
PRJEB85717Prognostic value of gut microbiome for progression from normal cognition to mild cognitive impairment within 4 years12025
PRJEB75958REpeated Fecal microbiota REStoration in Hiv12024
PRJNA485056Metagenomic sequencing of stool samples from rural communities from north-eastern Madagascar12018
PRJNA858062Homo sapiens Raw sequence reads12022
PRJNA863406Microbiome Analysis in spondyloarthritis patients12022
PRJNA1056458Diet-omics in the Study of Urban and Rural Crohn disease Evolution (SOURCE) cohort12024